Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 SNORA43.1-201ENST00000364863 140 ntBASIC6□□□□□ -1.45
HNF4AP41235 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6□□□□□ -1.45
HNF4AP41235 AL353625.1-202ENST00000366273 571 ntBASIC6□□□□□ -1.45
HNF4AP41235 OR13C3-201ENST00000374781 1108 ntBASIC6□□□□□ -1.45
HNF4AP41235 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 GAPDHP15-201ENST00000398586 975 ntBASIC6□□□□□ -1.45
HNF4AP41235 SNORA79B-201ENST00000410557 148 ntBASIC6□□□□□ -1.45
HNF4AP41235 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6□□□□□ -1.45
HNF4AP41235 AL139158.1-201ENST00000424719 340 ntBASIC6□□□□□ -1.45
HNF4AP41235 RPS7P14-201ENST00000426405 583 ntBASIC6□□□□□ -1.45
HNF4AP41235 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 PPIAP10-201ENST00000438675 458 ntBASIC6□□□□□ -1.45
HNF4AP41235 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6□□□□□ -1.45
HNF4AP41235 AL133351.3-201ENST00000454998 193 ntBASIC6□□□□□ -1.45
HNF4AP41235 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6□□□□□ -1.45
HNF4AP41235 MTND6P32-201ENST00000457611 483 ntBASIC6□□□□□ -1.45
HNF4AP41235 AC098818.1-201ENST00000478593 252 ntBASIC6□□□□□ -1.45
HNF4AP41235 AC098799.1-201ENST00000504752 800 ntBASIC6□□□□□ -1.45
HNF4AP41235 CCNHP1-201ENST00000513311 678 ntBASIC6□□□□□ -1.45
HNF4AP41235 CYP4F27P-201ENST00000514557 494 ntBASIC6□□□□□ -1.45
HNF4AP41235 AP003033.2-201ENST00000528901 805 ntBASIC6□□□□□ -1.45
HNF4AP41235 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6□□□□□ -1.45
HNF4AP41235 AP001858.2-201ENST00000536213 601 ntBASIC6□□□□□ -1.45
HNF4AP41235 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6□□□□□ -1.45
HNF4AP41235 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6□□□□□ -1.45
HNF4AP41235 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6□□□□□ -1.45
HNF4AP41235 AC007494.1-201ENST00000562293 760 ntBASIC6□□□□□ -1.45
HNF4AP41235 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
HNF4AP41235 MT1CP-201ENST00000567054 174 ntBASIC6□□□□□ -1.45
HNF4AP41235 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6□□□□□ -1.45
HNF4AP41235 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6□□□□□ -1.45
HNF4AP41235 AC011500.1-201ENST00000601963 469 ntBASIC6□□□□□ -1.45
HNF4AP41235 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6□□□□□ -1.45
HNF4AP41235 AC022106.1-201ENST00000612834 766 ntBASIC6□□□□□ -1.45
HNF4AP41235 AC010325.3-201ENST00000641084 394 ntBASIC6□□□□□ -1.45
HNF4AP41235 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6□□□□□ -1.45
HNF4AP41235 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HNF4AP41235 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6□□□□□ -1.45
HNF4AP41235 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 LINC01613-201ENST00000561476 2780 ntBASIC6□□□□□ -1.45
HNF4AP41235 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HNF4AP41235 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 AP001284.1-201ENST00000528393 2118 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.99□□□□□ -1.45
HNF4AP41235 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.99□□□□□ -1.45
HNF4AP41235 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HNF4AP41235 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HNF4AP41235 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 AC097063.1-201ENST00000426714 1797 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 RNU1-49P-201ENST00000363468 159 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 RN7SKP250-201ENST00000363924 321 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.99□□□□□ -1.45
HNF4AP41235 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HNF4AP41235 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.99□□□□□ -1.45
HNF4AP41235 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.99□□□□□ -1.45
HNF4AP41235 AC106901.1-201ENST00000425086 698 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AC021876.1-201ENST00000425959 359 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AC016027.5-201ENST00000427227 210 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.99□□□□□ -1.45
HNF4AP41235 AC013403.1-201ENST00000436954 263 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HNF4AP41235 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 RBMY2TP-201ENST00000451162 947 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.99□□□□□ -1.45
HNF4AP41235 RN7SL552P-201ENST00000462094 276 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AL355032.1-201ENST00000472981 438 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 SNX18P24-201ENST00000505249 671 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.99□□□□□ -1.45
HNF4AP41235 RNA5SP441-201ENST00000516809 88 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.99□□□□□ -1.45
HNF4AP41235 NPIPB14P-203ENST00000532298 987 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.99□□□□□ -1.45
HNF4AP41235 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.99□□□□□ -1.45
HNF4AP41235 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 MTCO1P1-201ENST00000624263 1081 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HNF4AP41235 AC068870.3-201ENST00000625077 2536 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.99□□□□□ -1.45
HNF4AP41235 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms