Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SLC6A4P31645 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SLC6A4P31645 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.52□□□□□ -1.37
SLC6A4P31645 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.52□□□□□ -1.37
SLC6A4P31645 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.51□□□□□ -1.37
SLC6A4P31645 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC005618.1-201ENST00000606901 3148 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.51□□□□□ -1.37
SLC6A4P31645 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.51□□□□□ -1.37
SLC6A4P31645 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 RNU6-697P-201ENST00000363348 107 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 RNA5SP346-201ENST00000363541 121 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AL589994.1-201ENST00000404962 340 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 RN7SKP121-201ENST00000410842 305 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 VN1R51P-201ENST00000411675 945 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC097721.1-201ENST00000427150 1253 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AL645931.1-201ENST00000439737 410 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AL645936.1-201ENST00000441979 518 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 RPSAP40-201ENST00000442343 891 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AL590004.3-202ENST00000445883 451 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.51□□□□□ -1.37
SLC6A4P31645 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.51□□□□□ -1.37
SLC6A4P31645 RPL12P30-201ENST00000488389 499 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC095052.1-201ENST00000509955 863 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 HMGB1P47-201ENST00000511281 589 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AC011853.1-201ENST00000518911 454 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
SLC6A4P31645 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC073916.1-201ENST00000545095 130 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AC084759.1-201ENST00000561168 290 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AC233266.2-201ENST00000567067 528 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.51□□□□□ -1.37
SLC6A4P31645 MIR4502-201ENST00000580432 81 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.51□□□□□ -1.37
SLC6A4P31645 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC068620.3-201ENST00000602749 560 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 SNORA74.4-201ENST00000607595 199 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AL080312.2-201ENST00000613001 630 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AL137246.2-201ENST00000613439 662 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AC004801.6-201ENST00000616571 978 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 MIR6861-201ENST00000618657 64 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AC073592.6-201ENST00000624271 415 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC013437.2-201ENST00000639587 677 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SLC6A4P31645 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 CUL4AP1-201ENST00000514750 1863 ntBASIC6.51□□□□□ -1.37
SLC6A4P31645 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SLC6A4P31645 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.51□□□□□ -1.37
SLC6A4P31645 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SLC6A4P31645 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SLC6A4P31645 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SLC6A4P31645 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SLC6A4P31645 AC105235.1-201ENST00000623208 1816 ntBASIC6.5□□□□□ -1.37
SLC6A4P31645 MAPK10-287ENST00000641217 3037 ntBASIC6.5□□□□□ -1.37
SLC6A4P31645 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SLC6A4P31645 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SLC6A4P31645 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.5□□□□□ -1.37
SLC6A4P31645 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
SLC6A4P31645 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SLC6A4P31645 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SLC6A4P31645 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.5□□□□□ -1.37
SLC6A4P31645 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SLC6A4P31645 CASC19-255ENST00000641733 1385 ntBASIC6.5□□□□□ -1.37
SLC6A4P31645 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.5□□□□□ -1.37
SLC6A4P31645 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SLC6A4P31645 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SLC6A4P31645 RNA5SP110-201ENST00000362638 115 ntBASIC6.5□□□□□ -1.37
SLC6A4P31645 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.5□□□□□ -1.37
SLC6A4P31645 TRIM60P17-201ENST00000415181 719 ntBASIC6.5□□□□□ -1.37
SLC6A4P31645 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.5□□□□□ -1.37
SLC6A4P31645 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.5□□□□□ -1.37
SLC6A4P31645 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.5□□□□□ -1.37
SLC6A4P31645 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.5□□□□□ -1.37
SLC6A4P31645 AL354707.3-201ENST00000427308 331 ntBASIC6.5□□□□□ -1.37
SLC6A4P31645 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SLC6A4P31645 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SLC6A4P31645 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.5□□□□□ -1.37
SLC6A4P31645 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.5□□□□□ -1.37
SLC6A4P31645 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.5□□□□□ -1.37
SLC6A4P31645 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SLC6A4P31645 AP002345.1-201ENST00000456493 928 ntBASIC6.5□□□□□ -1.37
SLC6A4P31645 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms