Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC007562.1-201ENST00000421819 517 ntBASIC6.59□□□□□ -1.35
COL11A1P12107 AC023274.2-201ENST00000445264 521 ntBASIC6.59□□□□□ -1.35
COL11A1P12107 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 RNA5SP92-201ENST00000516437 110 ntBASIC6.59□□□□□ -1.35
COL11A1P12107 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
COL11A1P12107 AL049779.3-201ENST00000557141 606 ntBASIC6.59□□□□□ -1.35
COL11A1P12107 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.59□□□□□ -1.35
COL11A1P12107 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 AC025574.2-201ENST00000615621 514 ntBASIC6.59□□□□□ -1.35
COL11A1P12107 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL11A1P12107 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
COL11A1P12107 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
COL11A1P12107 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.58□□□□□ -1.36
COL11A1P12107 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.58□□□□□ -1.36
COL11A1P12107 AL161912.4-201ENST00000623889 2468 ntBASIC6.58□□□□□ -1.36
COL11A1P12107 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COL11A1P12107 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.58□□□□□ -1.36
COL11A1P12107 AL360271.1-201ENST00000395679 510 ntBASIC6.58□□□□□ -1.36
COL11A1P12107 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.58□□□□□ -1.36
COL11A1P12107 AC100832.1-201ENST00000471945 383 ntBASIC6.58□□□□□ -1.36
COL11A1P12107 AC105384.2-201ENST00000508433 640 ntBASIC6.58□□□□□ -1.36
COL11A1P12107 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.58□□□□□ -1.36
COL11A1P12107 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.58□□□□□ -1.36
COL11A1P12107 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.58□□□□□ -1.36
COL11A1P12107 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.58□□□□□ -1.36
COL11A1P12107 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.58□□□□□ -1.36
COL11A1P12107 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.58□□□□□ -1.36
COL11A1P12107 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.58□□□□□ -1.36
COL11A1P12107 TAS2R6P-201ENST00000605022 826 ntBASIC6.58□□□□□ -1.36
COL11A1P12107 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
COL11A1P12107 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COL11A1P12107 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.58□□□□□ -1.36
COL11A1P12107 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL11A1P12107 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.58□□□□□ -1.36
COL11A1P12107 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 AC235565.1-201ENST00000456962 1325 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 AL139148.1-201ENST00000427122 680 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 BX284632.1-201ENST00000478218 541 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.57□□□□□ -1.36
COL11A1P12107 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 AC139697.1-201ENST00000548429 745 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 SDR42E1P1-201ENST00000611327 477 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
COL11A1P12107 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COL11A1P12107 RNA5SP251-201ENST00000410614 137 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.57□□□□□ -1.36
COL11A1P12107 RPL35AP19-201ENST00000469425 329 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.57□□□□□ -1.36
COL11A1P12107 NRBF2P4-201ENST00000520874 850 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.57□□□□□ -1.36
COL11A1P12107 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.57□□□□□ -1.36
COL11A1P12107 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.57□□□□□ -1.36
COL11A1P12107 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COL11A1P12107 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL11A1P12107 PRNCR1-201ENST00000635449 12727 ntBASIC6.57□□□□□ -1.36
COL11A1P12107 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL11A1P12107 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL11A1P12107 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.56□□□□□ -1.36
COL11A1P12107 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL11A1P12107 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL11A1P12107 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.56□□□□□ -1.36
COL11A1P12107 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL11A1P12107 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL11A1P12107 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.56□□□□□ -1.36
COL11A1P12107 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms