Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPL6P21-201ENST00000418672 846 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 ATP5LP4-201ENST00000434169 307 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL1P09341 PHBP4-201ENST00000437447 837 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 EMC3-AS1-205ENST00000438698 534 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL1P09341 GAPDHP23-201ENST00000444823 993 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 AKR1D1P1-201ENST00000457236 936 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 RN7SKP198-201ENST00000459286 306 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 RN7SL369P-201ENST00000477138 299 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 AC018645.1-201ENST00000505003 109 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 KHDC1P1-201ENST00000511053 508 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL1P09341 AP001858.2-201ENST00000536213 601 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL1P09341 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL1P09341 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL1P09341 AC127024.5-201ENST00000580085 462 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.52□□□□□ -1.69
CXCL1P09341 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.52□□□□□ -1.69
CXCL1P09341 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 TP53TG1_2.1-201ENST00000611226 182 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 AC009283.1-201ENST00000615852 645 ntBASIC4.52□□□□□ -1.69
CXCL1P09341 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL1P09341 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL1P09341 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL1P09341 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CXCL1P09341 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL1P09341 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 AC010894.1-201ENST00000313760 361 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 OR9K1P-201ENST00000326513 941 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL1P09341 RNU1-84P-201ENST00000365447 164 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 AC026310.1-201ENST00000396004 378 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 AC024937.2-201ENST00000411669 1242 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL1P09341 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL1P09341 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 SUMO2P8-201ENST00000434672 286 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 RPS7P4-201ENST00000444127 582 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 RN7SL836P-201ENST00000476140 296 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 SNX18P24-201ENST00000505249 671 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL1P09341 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CXCL1P09341 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL1P09341 RBMS2P1-201ENST00000525031 1226 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL1P09341 VDAC2P2-201ENST00000544463 901 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL1P09341 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CXCL1P09341 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL1P09341 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.51□□□□□ -1.69
CXCL1P09341 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL1P09341 AC011193.2-201ENST00000582638 367 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 RN7SL261P-201ENST00000613441 282 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.51□□□□□ -1.69
CXCL1P09341 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL1P09341 HSPD1P7-201ENST00000447985 1686 ntBASIC4.51□□□□□ -1.69
CXCL1P09341 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CXCL1P09341 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms