Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC066692.1-201ENST00000421721 457 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AK3P5-201ENST00000432033 519 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 TUBB4BP6-201ENST00000437576 479 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC096775.1-201ENST00000437724 448 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC023141.8-201ENST00000442554 208 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC079080.1-201ENST00000479841 822 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC006539.1-201ENST00000481419 501 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC114781.3-201ENST00000512083 142 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 PCNAP4-201ENST00000532690 730 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 NPM1P42-201ENST00000560329 862 ntBASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
HLA-DQB2P05538 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 RNU1-150P-201ENST00000362491 162 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 RN7SKP78-201ENST00000364711 318 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 SUGT1P2-201ENST00000379452 992 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AC115283.1-201ENST00000427353 400 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 BX323845.3-201ENST00000428215 527 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 RPL12P16-201ENST00000431098 498 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 PCBP2P1-201ENST00000437262 977 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AC015983.1-201ENST00000441577 373 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AL359839.1-201ENST00000451975 1160 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AL122020.1-201ENST00000472287 459 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 RN7SL57P-201ENST00000493687 290 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AL356801.1-201ENST00000559320 294 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AC006115.2-201ENST00000596823 202 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 MAPK10-270ENST00000641102 3538 ntBASIC5.94□□□□□ -1.46
HLA-DQB2P05538 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HLA-DQB2P05538 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 AC084782.1-201ENST00000564401 2465 ntBASIC5.93□□□□□ -1.46
HLA-DQB2P05538 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQB2P05538 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms