Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RPS4XP5-201ENST00000419038 768 ntBASIC5.82□□□□□ -1.48
TNFP01375 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFP01375 AC242426.1-201ENST00000435270 960 ntBASIC5.82□□□□□ -1.48
TNFP01375 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFP01375 AC064862.4-201ENST00000442180 334 ntBASIC5.82□□□□□ -1.48
TNFP01375 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFP01375 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFP01375 SDC4P-201ENST00000453285 601 ntBASIC5.82□□□□□ -1.48
TNFP01375 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.82□□□□□ -1.48
TNFP01375 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFP01375 CYCSP22-201ENST00000517555 339 ntBASIC5.82□□□□□ -1.48
TNFP01375 TMEM97P2-201ENST00000517841 403 ntBASIC5.82□□□□□ -1.48
TNFP01375 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFP01375 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFP01375 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFP01375 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFP01375 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFP01375 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TNFP01375 AC006511.3-201ENST00000624929 1783 ntBASIC5.82□□□□□ -1.48
TNFP01375 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFP01375 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFP01375 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFP01375 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFP01375 OR13C1P-202ENST00000641378 2919 ntBASIC5.81□□□□□ -1.48
TNFP01375 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
TNFP01375 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFP01375 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TNFP01375 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
TNFP01375 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 AC087752.1-201ENST00000391360 558 ntBASIC5.81□□□□□ -1.48
TNFP01375 AK4P4-201ENST00000419465 646 ntBASIC5.81□□□□□ -1.48
TNFP01375 RPL34P3-201ENST00000421454 338 ntBASIC5.81□□□□□ -1.48
TNFP01375 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFP01375 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFP01375 CHEK2P5-201ENST00000423877 246 ntBASIC5.81□□□□□ -1.48
TNFP01375 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFP01375 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 YWHAEP1-201ENST00000453697 763 ntBASIC5.81□□□□□ -1.48
TNFP01375 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 RN7SL273P-201ENST00000481561 299 ntBASIC5.81□□□□□ -1.48
TNFP01375 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFP01375 HMGN2P36-201ENST00000529541 409 ntBASIC5.81□□□□□ -1.48
TNFP01375 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFP01375 OR4A40P-201ENST00000533878 948 ntBASIC5.81□□□□□ -1.48
TNFP01375 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFP01375 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFP01375 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 AL049840.6-202ENST00000603373 279 ntBASIC5.81□□□□□ -1.48
TNFP01375 MIR193BHG-214ENST00000641765 509 ntBASIC5.81□□□□□ -1.48
TNFP01375 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 AL731532.1-201ENST00000623972 4236 ntBASIC5.81□□□□□ -1.48
TNFP01375 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFP01375 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TNFP01375 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFP01375 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFP01375 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFP01375 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TNFP01375 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TNFP01375 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TNFP01375 FUNDC2P3-201ENST00000334716 533 ntBASIC5.8□□□□□ -1.48
TNFP01375 RN7SKP286-201ENST00000410894 299 ntBASIC5.8□□□□□ -1.48
TNFP01375 TMA16P2-201ENST00000413187 601 ntBASIC5.8□□□□□ -1.48
TNFP01375 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFP01375 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.8□□□□□ -1.48
TNFP01375 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TNFP01375 DEFA9P-201ENST00000433042 285 ntBASIC5.8□□□□□ -1.48
TNFP01375 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFP01375 CUBNP2-201ENST00000443534 1139 ntBASIC5.8□□□□□ -1.48
TNFP01375 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms