Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SUGT1P3-202ENST00000604259 383 ntBASIC6.44□□□□□ -1.38
TIMP1P01033 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.44□□□□□ -1.38
TIMP1P01033 AL445222.1-201ENST00000607259 628 ntBASIC6.44□□□□□ -1.38
TIMP1P01033 AC012254.5-201ENST00000623573 478 ntBASIC6.44□□□□□ -1.38
TIMP1P01033 AL355377.1-201ENST00000621125 1653 ntBASIC6.44□□□□□ -1.38
TIMP1P01033 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.44□□□□□ -1.38
TIMP1P01033 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.44□□□□□ -1.38
TIMP1P01033 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TIMP1P01033 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.44□□□□□ -1.38
TIMP1P01033 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TIMP1P01033 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.44□□□□□ -1.38
TIMP1P01033 AL049634.1-201ENST00000453770 1720 ntBASIC6.44□□□□□ -1.38
TIMP1P01033 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TIMP1P01033 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TIMP1P01033 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.44□□□□□ -1.38
TIMP1P01033 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TIMP1P01033 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TIMP1P01033 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.44□□□□□ -1.38
TIMP1P01033 AC025470.1-201ENST00000510053 2032 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TIMP1P01033 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TIMP1P01033 AL359195.2-201ENST00000623657 4412 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.43□□□□□ -1.38
TIMP1P01033 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
TIMP1P01033 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TIMP1P01033 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TIMP1P01033 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.43□□□□□ -1.38
TIMP1P01033 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.43□□□□□ -1.38
TIMP1P01033 AL121835.1-201ENST00000404250 354 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 RPL35AP24-201ENST00000413846 330 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 HMGA1P8-201ENST00000414130 321 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.43□□□□□ -1.38
TIMP1P01033 AC097721.1-201ENST00000427150 1253 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.43□□□□□ -1.38
TIMP1P01033 RANP1-206ENST00000455094 651 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 RN7SL860P-201ENST00000473738 223 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 AC079841.1-201ENST00000481228 950 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.43□□□□□ -1.38
TIMP1P01033 AC253576.1-201ENST00000511645 1156 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.43□□□□□ -1.38
TIMP1P01033 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.43□□□□□ -1.38
TIMP1P01033 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.43□□□□□ -1.38
TIMP1P01033 AC022726.2-201ENST00000634673 547 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 AC087269.2-201ENST00000641764 975 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TIMP1P01033 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TIMP1P01033 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TIMP1P01033 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TIMP1P01033 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.43□□□□□ -1.38
TIMP1P01033 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TIMP1P01033 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 FO082842.1-201ENST00000423552 1370 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.43□□□□□ -1.38
TIMP1P01033 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TIMP1P01033 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TIMP1P01033 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TIMP1P01033 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.42□□□□□ -1.38
TIMP1P01033 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TIMP1P01033 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TIMP1P01033 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 AC005042.1-201ENST00000393397 800 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 RPL37P18-201ENST00000411602 243 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 SLC35E1P1-201ENST00000419313 864 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 AC099677.3-201ENST00000427081 395 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.42□□□□□ -1.38
TIMP1P01033 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.42□□□□□ -1.38
TIMP1P01033 AC091685.2-201ENST00000454924 864 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 LDHBP2-201ENST00000456969 1005 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 AL355032.1-201ENST00000472981 438 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 CBX1P5-201ENST00000475330 559 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.42□□□□□ -1.38
TIMP1P01033 RN7SL808P-201ENST00000496066 299 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.42□□□□□ -1.38
TIMP1P01033 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.42□□□□□ -1.38
TIMP1P01033 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.42□□□□□ -1.38
TIMP1P01033 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.42□□□□□ -1.38
TIMP1P01033 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 AC068870.2-201ENST00000620635 389 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 AC003992.1-201ENST00000635364 557 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 OR11H2-202ENST00000641517 1085 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
TIMP1P01033 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.42□□□□□ -1.38
TIMP1P01033 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.42□□□□□ -1.38
TIMP1P01033 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 AC007842.1-201ENST00000597336 2039 ntBASIC6.42□□□□□ -1.38
TIMP1P01033 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TIMP1P01033 MRE11P1-201ENST00000464884 2127 ntBASIC6.41□□□□□ -1.38
TIMP1P01033 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TIMP1P01033 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TIMP1P01033 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms