Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
USH2AO75445 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 ERMN-202ENST00000409216 746 ntTSL 4 BASIC2.5□□□□□ -2.01
USH2AO75445 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 ATP6V1G1P7-201ENST00000415853 349 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AC119751.6-201ENST00000416712 186 ntBASIC2.5□□□□□ -2.01
USH2AO75445 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 DUBR-205ENST00000495228 411 ntTSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 MIR2117-201ENST00000516780 80 ntBASIC2.5□□□□□ -2.01
USH2AO75445 OR7E158P-201ENST00000524483 910 ntBASIC2.5□□□□□ -2.01
USH2AO75445 BMPR1APS2-201ENST00000527904 1012 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 AC134349.2-201ENST00000535136 910 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 AC079414.3-201ENST00000612986 1090 ntBASIC2.5□□□□□ -2.01
USH2AO75445 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 NLRP3P1-201ENST00000622303 1785 ntBASIC2.5□□□□□ -2.01
USH2AO75445 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
USH2AO75445 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 RN7SKP145-201ENST00000363291 303 ntBASIC2.49□□□□□ -2.01
USH2AO75445 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 AL136455.1-201ENST00000441083 1240 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 RN7SL447P-201ENST00000494711 245 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AC008629.2-201ENST00000503783 483 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USH2AO75445 MAL2-207ENST00000522828 603 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 CASC19-205ENST00000641013 1411 ntBASIC2.49□□□□□ -2.01
USH2AO75445 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 AC090220.1-201ENST00000593078 1699 ntBASIC2.49□□□□□ -2.01
USH2AO75445 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USH2AO75445 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 XRCC6P5-201ENST00000435236 1795 ntBASIC2.49□□□□□ -2.01
USH2AO75445 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
USH2AO75445 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 RN7SKP95-201ENST00000362860 303 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 RPS4XP20-201ENST00000505751 772 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 AC005000.1-201ENST00000536192 288 ntBASIC2.49□□□□□ -2.01
USH2AO75445 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC2.49□□□□□ -2.01
USH2AO75445 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC2.49□□□□□ -2.01
USH2AO75445 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.49□□□□□ -2.01
USH2AO75445 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USH2AO75445 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms