Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHOX2O60902 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SHOX2O60902 RN7SKP91-201ENST00000410852 288 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHOX2O60902 AL592114.2-201ENST00000440142 532 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 LINC02210-201ENST00000444561 288 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.92□□□□□ -1.46
SHOX2O60902 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.92□□□□□ -1.46
SHOX2O60902 RN7SL369P-201ENST00000477138 299 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 RN7SL326P-201ENST00000477493 296 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AC006539.1-201ENST00000481419 501 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AC105391.1-201ENST00000503155 1045 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.92□□□□□ -1.46
SHOX2O60902 AC093325.1-201ENST00000508378 326 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.92□□□□□ -1.46
SHOX2O60902 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.92□□□□□ -1.46
SHOX2O60902 AC137549.1-201ENST00000514243 533 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AC021146.10-201ENST00000515628 706 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
SHOX2O60902 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.92□□□□□ -1.46
SHOX2O60902 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.92□□□□□ -1.46
SHOX2O60902 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AC092718.4-201ENST00000566639 716 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.92□□□□□ -1.46
SHOX2O60902 AL139124.1-201ENST00000609123 421 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHOX2O60902 uc_338.26-201ENST00000612659 160 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHOX2O60902 MIR6813-201ENST00000621638 56 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.92□□□□□ -1.46
SHOX2O60902 AC103703.1-201ENST00000634783 663 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.92□□□□□ -1.46
SHOX2O60902 SAMMSON-227ENST00000642114 1199 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SHOX2O60902 DNM1P47-203ENST00000571780 12667 ntBASIC5.92□□□□□ -1.46
SHOX2O60902 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SHOX2O60902 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHOX2O60902 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHOX2O60902 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.92□□□□□ -1.46
SHOX2O60902 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHOX2O60902 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
SHOX2O60902 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SHOX2O60902 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.91□□□□□ -1.46
SHOX2O60902 AL442128.2-201ENST00000620246 1824 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 RNA5SP375-201ENST00000362975 119 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
SHOX2O60902 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.91□□□□□ -1.46
SHOX2O60902 CTSL3P-202ENST00000412179 788 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AL139135.1-201ENST00000412675 209 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.91□□□□□ -1.46
SHOX2O60902 RPS15AP30-201ENST00000420976 390 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 SETP9-201ENST00000423837 832 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.91□□□□□ -1.46
SHOX2O60902 PPIAP10-201ENST00000438675 458 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AC012512.1-201ENST00000446594 718 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 RN7SL72P-201ENST00000460697 269 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.91□□□□□ -1.46
SHOX2O60902 RN7SL70P-201ENST00000478322 302 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.91□□□□□ -1.46
SHOX2O60902 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.91□□□□□ -1.46
SHOX2O60902 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 RBMS2P1-201ENST00000525031 1226 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.91□□□□□ -1.46
SHOX2O60902 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.91□□□□□ -1.46
SHOX2O60902 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.91□□□□□ -1.46
SHOX2O60902 NANOGP3-201ENST00000605855 286 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AC009779.8-202ENST00000607990 932 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.91□□□□□ -1.46
SHOX2O60902 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 AC005514.1-201ENST00000623521 208 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 AC025574.1-201ENST00000554784 1653 ntBASIC5.91□□□□□ -1.46
SHOX2O60902 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHOX2O60902 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.91□□□□□ -1.46
SHOX2O60902 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SHOX2O60902 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SHOX2O60902 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHOX2O60902 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHOX2O60902 TCP1P3-201ENST00000414406 1498 ntBASIC5.9□□□□□ -1.46
SHOX2O60902 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms