Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RAB30-209ENST00000532548 644 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC140063.1-201ENST00000541343 259 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 BMS1P16-201ENST00000556075 1147 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ANP32BP1-202ENST00000568553 737 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL357137.1-201ENST00000604645 203 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL136141.1-201ENST00000605780 369 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL136304.1-201ENST00000607790 509 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ELMO2P1-202ENST00000614283 794 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC091932.2-201ENST00000623014 291 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AP003068.4-201ENST00000623192 802 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC022400.9-201ENST00000623633 273 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC021766.1-201ENST00000624404 741 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC106733.1-201ENST00000624476 1038 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 CLUHP10-201ENST00000631979 980 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL36AP21-202ENST00000639134 430 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02211-202ENST00000641091 839 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC009962.1-201ENST00000567327 3813 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC107027.3-201ENST00000565095 3473 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 FOLH1B-202ENST00000529567 2145 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 CREM-218ENST00000460270 1416 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 MTHFD2P5-201ENST00000320415 844 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 SNORD16-201ENST00000362803 99 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP448-201ENST00000363151 111 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RNU4-8P-201ENST00000364936 141 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 ARMCX7P-201ENST00000372828 562 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR654-201ENST00000385199 81 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 WISP3-205ENST00000409166 953 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 Z93019.1-201ENST00000416450 973 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AL157884.1-201ENST00000424561 454 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 OR2AH1P-201ENST00000425717 928 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 SNAI1P1-201ENST00000428587 777 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 CHCHD4P2-201ENST00000431135 420 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AL031584.1-201ENST00000447169 754 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AL591379.2-201ENST00000450223 397 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC004692.1-201ENST00000455430 424 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL12P39-201ENST00000455456 496 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 NDUFB11P1-201ENST00000455818 465 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC096915.1-201ENST00000456185 512 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 EIF2S2P5-201ENST00000457635 968 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RNU1-88P-201ENST00000459274 128 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL621P-201ENST00000472565 299 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL549P-201ENST00000478997 282 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 CCDC11P1-201ENST00000503137 1162 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP464-201ENST00000516251 108 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 MTCYBP19-201ENST00000517463 1124 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC100784.1-201ENST00000522790 310 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC018620.1-201ENST00000523233 379 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 OR7E161P-201ENST00000533722 967 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 TRAV33-201ENST00000557514 338 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms