Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RNA5SP453-201ENST00000362503 119 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RNU6-666P-201ENST00000363499 107 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 MIR197-201ENST00000384976 75 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 UBBP1-201ENST00000392399 473 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC211486.3-201ENST00000412694 621 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AL512504.1-201ENST00000415494 778 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 NAP1L4P2-201ENST00000425958 899 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 DPY19L1P2-201ENST00000426647 915 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AL354707.3-201ENST00000427308 331 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 IGLV3-4-201ENST00000432300 244 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AL731534.1-201ENST00000434711 269 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RPS3AP38-201ENST00000435889 763 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC245517.2-201ENST00000442890 346 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 MED28P7-201ENST00000456611 530 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RPSAP37-201ENST00000470913 821 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RPL5P14-201ENST00000494197 878 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 SCARNA5-201ENST00000516201 276 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC009729.1-201ENST00000548873 1133 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC127381.1-201ENST00000555979 939 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RN7SL208P-201ENST00000577964 296 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 DPRXP4-201ENST00000578053 568 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC090616.1-201ENST00000583895 447 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC092960.1-201ENST00000604762 351 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC012557.1-201ENST00000607115 611 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC012640.3-201ENST00000607847 430 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 uc_338.9-201ENST00000617424 182 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AL359715.4-201ENST00000606629 1436 ntBASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB1P1B2RPK0 AC107027.3-201ENST00000565095 3473 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 RNU6-304P-201ENST00000364855 107 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 MIR92A2-201ENST00000385299 75 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 NPM1P40-201ENST00000412758 733 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 ANXA2P2-201ENST00000435128 1020 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 RPL29P7-201ENST00000440227 457 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 SNRPBP1-201ENST00000443634 282 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 GEMIN8P3-201ENST00000445417 720 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 HSPA8P3-201ENST00000449300 780 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AC112187.1-201ENST00000455837 479 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 RNU7-27P-201ENST00000459281 62 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 RN7SL228P-201ENST00000470060 303 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AC020779.1-201ENST00000478757 796 ntBASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB1P1B2RPK0 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms