Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 OR10R3P-201ENST00000361688 942 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 RN7SKP144-201ENST00000411108 279 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC073410.1-201ENST00000435125 589 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC074367.1-201ENST00000438685 1125 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 RPL12P49-201ENST00000441100 121 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AL645936.1-201ENST00000441979 518 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 RPL12P30-201ENST00000488389 499 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC008628.1-201ENST00000508663 265 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 SETP12-201ENST00000514068 805 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 CR383656.14-201ENST00000551951 406 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC027575.3-201ENST00000583058 2747 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC139792.1-201ENST00000607051 647 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AL080312.2-201ENST00000613001 630 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC096861.1-201ENST00000616652 240 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 RFPL4AP6-201ENST00000616792 846 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AL355974.3-201ENST00000617383 467 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC005899.6-201ENST00000620729 297 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC138907.8-201ENST00000623981 2256 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 AC015799.1-201ENST00000622996 3122 ntBASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
TCRBV7S3A2A0A539 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC130304.1-201ENST00000622942 2385 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AL590762.3-201ENST00000436372 640 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AL353718.1-201ENST00000451028 517 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC099670.1-201ENST00000455141 783 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 RN7SL836P-201ENST00000476140 296 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC106806.2-201ENST00000509365 500 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 GUSBP9-201ENST00000510138 584 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 SNX18P25-201ENST00000510539 758 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 HMGN1P17-201ENST00000513734 295 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 MTND2P13-201ENST00000577438 1039 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 FAM60CP-201ENST00000591086 664 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AL357562.1-201ENST00000624911 609 ntBASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TCRBV7S3A2A0A539 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AL355834.1-201ENST00000556602 3965 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms