Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 NDUFB9P1-201ENST00000604683 510 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 OR8G7P-201ENST00000616658 848 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC024587.1-201ENST00000505925 2157 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01613-201ENST00000561476 2780 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 PSMA6P1-201ENST00000400275 741 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 RNU6-233P-201ENST00000410845 141 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AC010086.1-201ENST00000437359 1052 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 CEACAMP11-201ENST00000455211 583 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 RPL34P33-201ENST00000486062 334 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 TOMM22P4-201ENST00000511318 336 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 WBP1LP11-201ENST00000586141 328 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AP001267.4-201ENST00000602598 545 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AL592429.1-201ENST00000403909 1473 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 CR382285.2-201ENST00000624662 1495 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AC125336.1-201ENST00000508893 2827 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 AL359955.1-201ENST00000455242 3275 ntBASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDD3Q9Y3P4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 UGT2B24P-201ENST00000514441 1597 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 CASC19-238ENST00000641523 1558 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 EIF3EP1-201ENST00000433978 1316 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 KYNUP3-201ENST00000574386 1341 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC024651.2-201ENST00000562480 2098 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC234781.4-201ENST00000419384 244 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 VN1R20P-201ENST00000425215 966 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AL590399.2-201ENST00000427536 309 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC073410.1-201ENST00000435125 589 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 RPS3AP38-201ENST00000435889 763 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 NPM1P48-201ENST00000436002 853 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 KRT8P51-201ENST00000438938 274 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AL645936.1-201ENST00000441979 518 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AL512593.1-201ENST00000444758 779 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms