Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC139697.1-201ENST00000548429 745 ntBASIC7.43□□□□□ -1.22
SCN11AQ9UI33 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 TAS2R6P-201ENST00000605022 826 ntBASIC7.43□□□□□ -1.22
SCN11AQ9UI33 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 AC073429.2-201ENST00000569694 1444 ntBASIC7.43□□□□□ -1.22
SCN11AQ9UI33 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.43□□□□□ -1.22
SCN11AQ9UI33 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 NIFKP3-201ENST00000417799 865 ntBASIC7.43□□□□□ -1.22
SCN11AQ9UI33 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 RN7SL826P-201ENST00000479724 288 ntBASIC7.43□□□□□ -1.22
SCN11AQ9UI33 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 RBM22P1-201ENST00000578589 1214 ntBASIC7.43□□□□□ -1.22
SCN11AQ9UI33 AC012616.1-201ENST00000600294 197 ntBASIC7.43□□□□□ -1.22
SCN11AQ9UI33 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN11AQ9UI33 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 AC092724.1-201ENST00000624623 3397 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 AL161756.3-201ENST00000641216 2071 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 AC006058.1-201ENST00000568686 5067 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 OR6D1P-201ENST00000436165 939 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 SPRYD7P1-201ENST00000443861 570 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 RNU1-88P-201ENST00000459274 128 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 AL355032.1-201ENST00000472981 438 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 AC021678.3-201ENST00000517893 476 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 AC061975.7-201ENST00000592016 2692 ntBASIC7.42□□□□□ -1.22
SCN11AQ9UI33 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN11AQ9UI33 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AL360271.1-201ENST00000395679 510 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AL139148.1-201ENST00000427122 680 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AC005297.1-201ENST00000444765 862 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AL603882.1-201ENST00000463059 681 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 BX284632.1-201ENST00000478218 541 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 NDUFB5P1-201ENST00000508134 564 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AC092593.2-201ENST00000513866 913 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AL139407.1-201ENST00000613826 1175 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 AC021766.1-201ENST00000624404 741 ntBASIC7.41□□□□□ -1.22
SCN11AQ9UI33 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN11AQ9UI33 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms