Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC021422.1-201ENST00000621212 473 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC069542.2-201ENST00000624816 216 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AP001157.1-201ENST00000550837 2339 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 RNA5SP279-201ENST00000365513 117 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 RPL35AP3-201ENST00000414680 288 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 RPS4XP5-201ENST00000419038 768 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC096775.1-201ENST00000437724 448 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC097463.1-201ENST00000447288 481 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC091874.2-201ENST00000505889 720 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 PRMT5P1-201ENST00000514351 598 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC090826.1-203ENST00000569235 490 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 MIR4420-201ENST00000583944 77 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AL133481.2-203ENST00000607558 139 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AC093388.1-201ENST00000609166 430 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 AL352984.2-202ENST00000613699 155 ntBASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
VPS29Q9UBQ0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC008627.1-201ENST00000517511 1704 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 SELENOWP1-201ENST00000322792 252 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 GCNT1P4-201ENST00000404096 329 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 RN7SKP17-201ENST00000411242 351 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 NME1P1-201ENST00000420914 382 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 FRG2FP-204ENST00000453982 852 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 RNU1-88P-201ENST00000459274 128 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 RN7SL269P-201ENST00000467795 305 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC128716.1-201ENST00000475129 166 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 ST13P12-201ENST00000508958 1094 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC145423.1-201ENST00000605712 336 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AL021918.2-201ENST00000613415 194 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 AC111152.1-202ENST00000635848 339 ntBASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS29Q9UBQ0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 AC137056.2-201ENST00000624055 1958 ntBASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms