Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC007998.1-201ENST00000474156 672 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC106872.4-201ENST00000510050 523 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC114781.3-201ENST00000512083 142 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 RNA5SP434-201ENST00000516647 121 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC108673.3-201ENST00000609183 335 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 SNORA17.5-201ENST00000630429 132 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 TMSB4XP2-201ENST00000335179 210 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 SNORA70.9-201ENST00000384370 135 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AL132875.1-201ENST00000403623 949 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 U3.43-201ENST00000410734 213 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 RPS17P17-201ENST00000419392 409 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 MTND6P12-201ENST00000428247 522 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 RPL31P15-201ENST00000449770 338 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 SLC25A51P1-201ENST00000468432 871 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 RN7SL174P-201ENST00000475578 289 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AC021269.1-201ENST00000526860 705 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AP001804.1-201ENST00000526868 919 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AC024589.2-201ENST00000605642 1294 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AL445649.1-201ENST00000615941 691 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 RBMY1HP-201ENST00000382759 1389 ntBASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
HDAC6Q9UBN7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 AC105235.1-201ENST00000623208 1816 ntBASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 NPM1P10-201ENST00000398310 865 ntBASIC6.9□□□□□ -1.3
HDAC6Q9UBN7 AL096800.1-201ENST00000405326 893 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms