Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC110056.1-201ENST00000525759 911 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC092121.1-201ENST00000569452 202 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 MIR4301-201ENST00000577203 66 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 MIR4776-2-201ENST00000580204 80 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC119403.2-201ENST00000590960 598 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 SHQ1P1-201ENST00000437111 1544 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AL662795.2-201ENST00000624252 3706 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC027088.4-201ENST00000611559 1947 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 OR10R3P-201ENST00000361688 942 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AL353626.3-201ENST00000413399 657 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PTCD2P2-201ENST00000415579 1095 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AL035660.1-201ENST00000422041 222 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 KIF4CP-201ENST00000422742 1279 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 RPL23AP19-201ENST00000436229 369 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PCBP2P1-201ENST00000437262 977 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 TUBB4BP6-201ENST00000437576 479 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 BMS1P10-201ENST00000443754 1120 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 RAB28P2-201ENST00000454299 641 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AL022319.1-201ENST00000458183 1167 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 IGKV3D-34-201ENST00000522638 302 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 IGKV2-4-201ENST00000523070 340 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC008521.2-201ENST00000591021 259 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 OR7A8P-201ENST00000595427 913 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC137695.1-201ENST00000604126 489 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC016590.3-201ENST00000611171 753 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PCA3_2.1-201ENST00000612507 409 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC004836.1-201ENST00000623032 634 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 AC091305.2-201ENST00000624049 1576 ntBASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCF1Q9UBD9 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 OR52B3P-201ENST00000314715 928 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms