Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.08□□□□□ -1.44
AMBRA1Q9C0C7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AL929601.4-201ENST00000613011 1341 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AL359694.1-201ENST00000403247 604 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 RPS21P8-201ENST00000413365 247 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 ARL2BPP3-201ENST00000421226 480 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 MTND1P33-201ENST00000446251 917 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC099063.2-201ENST00000446360 662 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 RPL26P30-201ENST00000453533 435 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC063955.1-201ENST00000462872 685 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC020898.1-201ENST00000474167 787 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 MARK2P8-201ENST00000476069 952 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 LARP7P4-201ENST00000481075 878 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC022415.1-202ENST00000486612 523 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 PRELID3BP5-201ENST00000508612 460 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC139713.1-202ENST00000512366 460 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 OR52H2P-201ENST00000514607 902 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 RN7SKP253-201ENST00000516424 309 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 HMGB1P46-201ENST00000520062 610 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AP003080.1-202ENST00000526526 915 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AP003066.2-201ENST00000529375 555 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 LRRC34P1-201ENST00000542742 915 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AL121579.2-201ENST00000555466 590 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 MIR4509-3-201ENST00000578671 94 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 MIR4271-201ENST00000582451 67 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 MIR4509-2-201ENST00000583920 94 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC025811.1-201ENST00000604312 472 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC024589.2-201ENST00000605642 1294 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC015849.2-201ENST00000605738 409 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AL352984.2-201ENST00000611153 546 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AC009464.1-201ENST00000615731 469 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 MIR4509-1-201ENST00000618224 94 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AP001264.1-201ENST00000620602 703 ntBASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
AMBRA1Q9C0C7 AL033543.1-201ENST00000623440 13454 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC017002.4-201ENST00000604721 1525 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC010168.2-201ENST00000562691 5428 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms