Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL022311.1-201ENST00000623726 19416 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC022325.1-201ENST00000502748 2199 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AL355488.2-201ENST00000609909 2850 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.21□□□□□ -1.41
TRIM4Q9C037 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
TRIM4Q9C037 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM4Q9C037 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.21□□□□□ -1.41
TRIM4Q9C037 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM4Q9C037 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM4Q9C037 RNU1-46P-201ENST00000384425 164 ntBASIC6.21□□□□□ -1.42
TRIM4Q9C037 AL049697.3-201ENST00000406493 982 ntBASIC6.21□□□□□ -1.42
TRIM4Q9C037 RN7SKP144-201ENST00000411108 279 ntBASIC6.21□□□□□ -1.42
TRIM4Q9C037 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 GAPDHP48-201ENST00000436626 961 ntBASIC6.21□□□□□ -1.42
TRIM4Q9C037 RPL12P18-201ENST00000437175 325 ntBASIC6.21□□□□□ -1.42
TRIM4Q9C037 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM4Q9C037 HMGN1P17-201ENST00000513734 295 ntBASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC016180.1-201ENST00000567945 403 ntBASIC6.21□□□□□ -1.42
TRIM4Q9C037 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AL359955.1-201ENST00000455242 3275 ntBASIC6.21□□□□□ -1.42
TRIM4Q9C037 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM4Q9C037 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM4Q9C037 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRIM4Q9C037 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM4Q9C037 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC006600.2-201ENST00000624834 2506 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AL390879.1-201ENST00000439143 386 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 COX4I1P2-201ENST00000447446 547 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 RN7SL254P-201ENST00000460609 284 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 AL355032.1-201ENST00000472981 438 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC020937.1-201ENST00000519677 1013 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 IGHV1-14-201ENST00000523391 241 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AP001357.1-201ENST00000586304 1053 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC008536.1-201ENST00000602872 669 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC091133.5-201ENST00000603088 301 ntBASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM4Q9C037 AC108865.2-201ENST00000606881 432 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms