Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC117532.1-201ENST00000514638 323 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RNU6-943P-201ENST00000516960 98 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RFPL1S-203ENST00000539579 330 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC024909.2-201ENST00000553035 286 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AL135978.1-201ENST00000553618 1266 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC090888.1-201ENST00000561335 1141 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC104229.1-201ENST00000561364 255 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC091932.1-201ENST00000569381 427 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RN7SL199P-201ENST00000578752 281 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RN7SL656P-201ENST00000579044 281 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 ARGFXP2-201ENST00000579304 949 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RN7SL404P-201ENST00000582421 281 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 MIR4470-201ENST00000583453 72 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC079610.2-201ENST00000604818 690 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC067838.1-201ENST00000606064 577 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC122710.3-201ENST00000606566 541 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC211433.3-201ENST00000623770 375 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC069542.2-201ENST00000624816 216 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC013488.1-201ENST00000526618 1838 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC007406.5-201ENST00000570140 3170 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 MIR152-201ENST00000385212 87 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 RNU6-1242P-201ENST00000391052 103 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 CXADRP1-201ENST00000398098 1095 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 OR7E156P-201ENST00000400303 464 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 USP9YP26-201ENST00000421008 661 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AL035407.1-201ENST00000429211 571 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AL606490.7-201ENST00000433136 191 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC046176.1-201ENST00000435260 1170 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AL138878.2-201ENST00000440581 1241 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AL161626.1-201ENST00000441480 490 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 MTND2P4-201ENST00000445034 1004 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC093799.1-201ENST00000452411 499 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 FTH1P8-201ENST00000498161 514 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 SCARNA6-201ENST00000515982 265 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC087752.2-201ENST00000521219 281 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC079064.1-201ENST00000528365 362 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC005479.3-201ENST00000602790 431 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 VIS1.1-201ENST00000610517 203 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AL603755.1-201ENST00000619504 163 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 MIR6813-201ENST00000621638 56 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC011471.4-201ENST00000638271 216 ntBASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
FOXP3Q9BZS1 AC020658.2-201ENST00000559030 4020 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms