Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM3Q9BZL3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC119674.1-202ENST00000641333 1860 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 MUC2-202ENST00000613187 4845 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 RNA5SP346-201ENST00000363541 121 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 RNU105B-201ENST00000364478 208 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 RN7SKP279-201ENST00000411383 298 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 HYALP1-201ENST00000417674 1279 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC009784.1-201ENST00000426484 460 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 OR52S1P-201ENST00000427016 937 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC112492.2-201ENST00000432774 1030 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 PHBP4-201ENST00000437447 837 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC005017.1-201ENST00000482002 490 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AL079303.1-201ENST00000486611 463 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 OR56A7P-201ENST00000524865 941 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC007347.2-201ENST00000623044 180 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 AC138965.3-201ENST00000623875 498 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 SMG1P4-204ENST00000523028 4131 ntBASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMIM3Q9BZL3 FBXL21-201ENST00000297158 1305 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 EIF3EP1-201ENST00000433978 1316 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 AL034546.1-201ENST00000623740 3693 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 AC100810.3-201ENST00000633189 2240 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 RNA5SP211-201ENST00000365516 117 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 U3.28-201ENST00000391249 210 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 EEF1GP6-201ENST00000402309 905 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 AL096829.1-201ENST00000413677 457 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 YWHAZP5-201ENST00000419975 730 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 AC009362.1-201ENST00000427253 406 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 HMGN2P27-201ENST00000427352 270 ntBASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.72□□□□□ -1.65
SMIM3Q9BZL3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms