Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 AC006504.8-201ENST00000621046 635 ntBASIC8.41□□□□□ -1.06
PHOX2BQ99453 AC011389.3-201ENST00000623273 999 ntBASIC8.41□□□□□ -1.06
PHOX2BQ99453 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PHOX2BQ99453 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
PHOX2BQ99453 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PHOX2BQ99453 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PHOX2BQ99453 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
PHOX2BQ99453 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PHOX2BQ99453 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PHOX2BQ99453 AC046144.1-201ENST00000478559 1853 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 FRG1BP-201ENST00000278882 761 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 FRG1CP-201ENST00000358464 769 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 Y_RNA.86-201ENST00000363020 111 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 RNU6-216P-201ENST00000363282 104 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 RNU6-666P-201ENST00000363499 107 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 RNU6-244P-201ENST00000391028 104 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 RPS3AP36-201ENST00000398190 775 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AL139100.1-201ENST00000408001 498 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC003080.1-201ENST00000413552 767 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 MTCO3P12-201ENST00000416718 547 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC140076.1-201ENST00000449897 361 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 FABP3P2-201ENST00000453169 399 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC025062.1-201ENST00000465163 644 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC114981.1-201ENST00000503897 678 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC109635.6-201ENST00000525487 1113 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 NF1P12-201ENST00000549593 583 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AL352979.3-201ENST00000553515 247 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 PSMA3P-201ENST00000555485 635 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC138915.2-201ENST00000569776 97 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 OR7A18P-201ENST00000600416 277 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 AC018695.5-201ENST00000605872 315 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 uc_338.30-201ENST00000612038 168 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.4□□□□□ -1.06
PHOX2BQ99453 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 CASC19-260ENST00000641828 2001 ntBASIC8.4□□□□□ -1.06
PHOX2BQ99453 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PHOX2BQ99453 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
PHOX2BQ99453 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PHOX2BQ99453 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PHOX2BQ99453 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC8.4□□□□□ -1.07
PHOX2BQ99453 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PHOX2BQ99453 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
PHOX2BQ99453 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.4□□□□□ -1.07
PHOX2BQ99453 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
PHOX2BQ99453 AC090771.1-201ENST00000585803 1618 ntBASIC8.4□□□□□ -1.07
PHOX2BQ99453 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.4□□□□□ -1.07
PHOX2BQ99453 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHOX2BQ99453 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 OR4G11P-202ENST00000642116 1414 ntBASIC8.39□□□□□ -1.07
PHOX2BQ99453 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC8.39□□□□□ -1.07
PHOX2BQ99453 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms