Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC112503.2-201ENST00000609005 552 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 MIR6070-201ENST00000613967 103 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AL359091.1-201ENST00000449048 1734 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 RN7SKP199-201ENST00000410325 305 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 OSTCP4-201ENST00000424397 449 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC245884.2-201ENST00000426257 404 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 MTATP6P17-201ENST00000431030 672 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 OR6R1P-201ENST00000431838 940 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 EMC3-AS1-205ENST00000438698 534 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 NPM1P23-201ENST00000440193 849 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 SOCS5P1-201ENST00000440415 949 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC073072.2-201ENST00000447425 348 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 RN7SL39P-201ENST00000462264 297 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 RPL12P24-201ENST00000474907 486 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 RPL12P31-201ENST00000478433 450 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 RN7SL267P-201ENST00000485107 261 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC093801.2-201ENST00000503966 1050 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC112184.1-201ENST00000505179 312 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC093325.1-201ENST00000508378 326 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC131935.1-201ENST00000524621 333 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC079148.1-201ENST00000565944 819 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC026898.1-201ENST00000586404 571 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 VN1R81P-201ENST00000602085 372 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC096947.1-201ENST00000603233 470 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC063944.3-201ENST00000609969 533 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AL050303.3-201ENST00000613704 284 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC074276.2-201ENST00000619891 348 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 MAPK10-350ENST00000641777 965 ntBASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.37□□□□□ -1.39
ATG4AQ8WYN0 AC010401.2-201ENST00000575137 4934 ntBASIC6.36□□□□□ -1.39
ATG4AQ8WYN0 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4AQ8WYN0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4AQ8WYN0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
ATG4AQ8WYN0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4AQ8WYN0 AL627171.1-201ENST00000618845 1308 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms