Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC096775.1-201ENST00000437724 448 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 FTH1P2-201ENST00000466086 412 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC098847.1-201ENST00000473094 348 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC092865.4-201ENST00000477936 615 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 RN7SL273P-201ENST00000481561 299 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AC005224.3-201ENST00000584683 2140 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 SNORA64.1-201ENST00000362600 132 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 RN7SKP286-201ENST00000410894 299 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 Y_RNA.625-201ENST00000411256 107 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 HMGN1P36-201ENST00000446623 298 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 GEMIN2P1-201ENST00000454246 752 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 RPL32P9-201ENST00000487963 407 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 RNA5SP362-201ENST00000516048 118 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 TXNP4-201ENST00000575018 310 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AC119403.2-201ENST00000590960 598 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AL352984.2-201ENST00000611153 546 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AL357562.1-201ENST00000624911 609 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AC009779.8-201ENST00000641684 4384 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AC079753.1-201ENST00000623243 3868 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 AC068733.2-201ENST00000605434 1418 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 PSG10P-201ENST00000501199 1500 ntBASIC6.12□□□□□ -1.43
SHROOM3Q8TF72 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 U3.7-201ENST00000363668 216 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 KIF4CP-201ENST00000422742 1279 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 UBFD1P1-201ENST00000473259 814 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 NDUFB5P1-201ENST00000508134 564 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC036111.2-201ENST00000533247 901 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC090236.2-201ENST00000587933 1101 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC145423.1-201ENST00000605712 336 ntBASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SHROOM3Q8TF72 RNFT1P3-201ENST00000340898 1052 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms