Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 UGT2B24P-201ENST00000514441 1597 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC011369.2-201ENST00000624423 1567 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL353625.1-202ENST00000366273 571 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 MTND2P12-201ENST00000417560 1252 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 SOCS5P1-201ENST00000440415 949 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC009237.1-201ENST00000442127 744 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 TIMM8BP2-201ENST00000445940 251 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL022237.1-201ENST00000446663 358 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 MORF4-201ENST00000447135 971 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 REG1CP-206ENST00000447469 496 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 OR11I1P-201ENST00000486033 954 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 RN7SL362P-201ENST00000494228 267 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 SNORA81.2-201ENST00000516868 170 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 SUMO2P19-201ENST00000518920 295 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 OR4A42P-201ENST00000531397 938 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC005828.7-201ENST00000607331 556 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 MIR6889-201ENST00000613185 59 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC024255.1-201ENST00000614376 102 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC107308.1-201ENST00000615897 301 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 MIR7159-201ENST00000620587 66 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC006840.1-201ENST00000623069 542 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL606537.1-201ENST00000607258 2011 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC011815.2-201ENST00000618230 2021 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AC020656.2-201ENST00000613291 5309 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AKAP17BP-201ENST00000431706 2719 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 TTC39DP-201ENST00000416781 1688 ntBASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AL157702.1-201ENST00000398764 426 ntBASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 UBE2V1P14-201ENST00000415815 558 ntBASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 CXCR2P1-202ENST00000443392 1074 ntBASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 RARRES2P3-201ENST00000457739 473 ntBASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AC113367.2-201ENST00000505749 160 ntBASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 SNORA48.9-201ENST00000516419 162 ntBASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.81□□□□□ -1.48
NUP54Q7Z3B4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 477.2 ms