Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ZNF549Q6P9A3 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.01□□□□□ -1.45
ZNF549Q6P9A3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ZNF549Q6P9A3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ZNF549Q6P9A3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ZNF549Q6P9A3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ZNF549Q6P9A3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 MARK2P4-201ENST00000503381 2380 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AP003486.1-201ENST00000525716 3994 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 SNORA21-201ENST00000362423 132 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 GNG5P2-201ENST00000372054 207 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 RNA5SP156-201ENST00000410250 110 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL365220.1-201ENST00000432923 399 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL390879.1-201ENST00000439143 386 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 FCF1P7-201ENST00000451185 558 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 CYCSP53-201ENST00000455540 265 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 RN7SL836P-201ENST00000476140 296 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AC098818.1-201ENST00000478593 252 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AC124945.1-201ENST00000485133 188 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 HAUS1P1-201ENST00000505275 832 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 CR383658.1-201ENST00000514609 734 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 NPIPB14P-203ENST00000532298 987 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 OR1E3-201ENST00000575608 948 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 CLIC4P2-201ENST00000601934 717 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL139022.2-201ENST00000606934 443 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AL136097.3-201ENST00000611097 505 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 AC096861.1-201ENST00000616652 240 ntBASIC6□□□□□ -1.45
ZNF549Q6P9A3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZNF549Q6P9A3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6□□□□□ -1.45
ZNF549Q6P9A3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 YWHAZP6-201ENST00000399764 738 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AL096800.1-201ENST00000405326 893 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 RN7SKP166-201ENST00000410812 305 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 THEM7P-201ENST00000419556 672 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 SFR1P2-201ENST00000421841 730 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC106901.1-201ENST00000425086 698 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC092865.3-201ENST00000425390 1026 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC002553.3-201ENST00000453002 341 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 SDC4P-201ENST00000453285 601 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 RPL23AP40-201ENST00000487630 390 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 CCDC11P1-201ENST00000503137 1162 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 OR7E99P-201ENST00000505750 922 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC118282.1-201ENST00000506408 765 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 RNU6-415P-201ENST00000516252 97 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 RNA5SP441-201ENST00000516809 88 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 2489.3 ms