Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 IGLV2-28-201ENST00000520681 304 ntBASIC6.9□□□□□ -1.3
CCNA1P78396 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.9□□□□□ -1.3
CCNA1P78396 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.9□□□□□ -1.3
CCNA1P78396 AC104695.2-201ENST00000605056 775 ntBASIC6.9□□□□□ -1.3
CCNA1P78396 RPL12P48-201ENST00000605620 304 ntBASIC6.9□□□□□ -1.3
CCNA1P78396 AP000864.1-201ENST00000609424 650 ntBASIC6.9□□□□□ -1.3
CCNA1P78396 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.9□□□□□ -1.3
CCNA1P78396 AL445649.1-201ENST00000615941 691 ntBASIC6.9□□□□□ -1.3
CCNA1P78396 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCNA1P78396 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCNA1P78396 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CCNA1P78396 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCNA1P78396 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCNA1P78396 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNA1P78396 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CCNA1P78396 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
CCNA1P78396 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNA1P78396 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.89□□□□□ -1.31
CCNA1P78396 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CCNA1P78396 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNA1P78396 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNA1P78396 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNA1P78396 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCNA1P78396 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCNA1P78396 RNA5SP46-201ENST00000362370 120 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 MIR1178-201ENST00000408396 91 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNA1P78396 AC097721.1-201ENST00000427150 1253 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNA1P78396 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNA1P78396 RPL23AP60-201ENST00000450011 454 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNA1P78396 EIF3LP3-201ENST00000495197 822 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 IGKV2-19-201ENST00000518132 283 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNA1P78396 OR6M2P-201ENST00000529831 871 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.89□□□□□ -1.31
CCNA1P78396 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.89□□□□□ -1.31
CCNA1P78396 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.89□□□□□ -1.31
CCNA1P78396 AC016180.1-201ENST00000567945 403 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CCNA1P78396 MIR4505-201ENST00000582238 73 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 OR7E18P-201ENST00000592589 702 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 FO393422.1-201ENST00000603908 708 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 SDR42E1P1-201ENST00000611327 477 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 AC069234.4-201ENST00000621276 412 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNA1P78396 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CCNA1P78396 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNA1P78396 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 RPS2P45-201ENST00000469997 2057 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 AL161901.1-201ENST00000624954 3425 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNA1P78396 AC005261.2-201ENST00000593427 4258 ntBASIC6.89□□□□□ -1.31
CCNA1P78396 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCNA1P78396 PARP4P2-201ENST00000446672 3326 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
CCNA1P78396 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CCNA1P78396 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.88□□□□□ -1.31
CCNA1P78396 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNA1P78396 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCNA1P78396 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNA1P78396 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
CCNA1P78396 Z93929.1-201ENST00000418200 1475 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCNA1P78396 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNA1P78396 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCNA1P78396 OR10R3P-201ENST00000361688 942 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 RNA5SP132-201ENST00000364725 118 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCNA1P78396 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.88□□□□□ -1.31
CCNA1P78396 RPL36P18-201ENST00000419316 318 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 KATNBL1P2-201ENST00000433311 835 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.88□□□□□ -1.31
CCNA1P78396 AL163193.1-201ENST00000444895 788 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.88□□□□□ -1.31
CCNA1P78396 LRRC37A14P-201ENST00000452297 462 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNA1P78396 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.88□□□□□ -1.31
CCNA1P78396 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.88□□□□□ -1.31
CCNA1P78396 IGKV2-18-201ENST00000522607 343 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 HMGN2P36-201ENST00000529541 409 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.88□□□□□ -1.31
CCNA1P78396 MIR1273E-201ENST00000581165 102 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.88□□□□□ -1.31
CCNA1P78396 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.88□□□□□ -1.31
CCNA1P78396 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.88□□□□□ -1.31
CCNA1P78396 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms