Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CLTCL1P53675 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
CLTCL1P53675 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLTCL1P53675 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CLTCL1P53675 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLTCL1P53675 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.26□□□□□ -1.09
CLTCL1P53675 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLTCL1P53675 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.26□□□□□ -1.09
CLTCL1P53675 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC8.26□□□□□ -1.09
CLTCL1P53675 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC8.26□□□□□ -1.09
CLTCL1P53675 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLTCL1P53675 AC025574.2-201ENST00000615621 514 ntBASIC8.26□□□□□ -1.09
CLTCL1P53675 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLTCL1P53675 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CLTCL1P53675 AL596275.2-208ENST00000641192 594 ntBASIC8.26□□□□□ -1.09
CLTCL1P53675 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.26□□□□□ -1.09
CLTCL1P53675 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLTCL1P53675 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CLTCL1P53675 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC8.26□□□□□ -1.09
CLTCL1P53675 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.26□□□□□ -1.09
CLTCL1P53675 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CLTCL1P53675 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.26□□□□□ -1.09
CLTCL1P53675 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.26□□□□□ -1.09
CLTCL1P53675 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLTCL1P53675 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CLTCL1P53675 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.26□□□□□ -1.09
CLTCL1P53675 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.25□□□□□ -1.09
CLTCL1P53675 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.25□□□□□ -1.09
CLTCL1P53675 CYCSP12-201ENST00000437729 300 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.25□□□□□ -1.09
CLTCL1P53675 AC021678.3-201ENST00000517893 476 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.25□□□□□ -1.09
CLTCL1P53675 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.25□□□□□ -1.09
CLTCL1P53675 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.25□□□□□ -1.09
CLTCL1P53675 RBM22P12-201ENST00000567098 1255 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 CCT5-215ENST00000625723 135 ntTSL 5 BASIC8.25□□□□□ -1.09
CLTCL1P53675 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 AL161756.3-201ENST00000641216 2071 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.25□□□□□ -1.09
CLTCL1P53675 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 AC114876.1-201ENST00000490962 1366 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.25□□□□□ -1.09
CLTCL1P53675 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.25□□□□□ -1.09
CLTCL1P53675 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CLTCL1P53675 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CLTCL1P53675 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.25□□□□□ -1.09
CLTCL1P53675 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.25□□□□□ -1.09
CLTCL1P53675 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.25□□□□□ -1.09
CLTCL1P53675 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.25□□□□□ -1.09
CLTCL1P53675 AC245047.2-201ENST00000441060 530 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.25□□□□□ -1.09
CLTCL1P53675 BX284632.1-201ENST00000478218 541 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 RPL32P9-201ENST00000487963 407 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.25□□□□□ -1.09
CLTCL1P53675 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.25□□□□□ -1.09
CLTCL1P53675 AC126615.2-201ENST00000553003 515 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 MIR4311-201ENST00000580794 100 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.25□□□□□ -1.09
CLTCL1P53675 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLTCL1P53675 MFSD8-239ENST00000641590 2479 ntBASIC8.25□□□□□ -1.09
CLTCL1P53675 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CLTCL1P53675 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.24□□□□□ -1.09
CLTCL1P53675 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC8.24□□□□□ -1.09
CLTCL1P53675 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.24□□□□□ -1.09
CLTCL1P53675 AL161912.4-201ENST00000623889 2468 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLTCL1P53675 AL589993.1-201ENST00000407450 2524 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.24□□□□□ -1.09
CLTCL1P53675 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLTCL1P53675 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLTCL1P53675 RNA5SP339-201ENST00000390987 122 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.24□□□□□ -1.09
CLTCL1P53675 RN7SKP273-201ENST00000411392 314 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC8.24□□□□□ -1.09
CLTCL1P53675 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLTCL1P53675 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.24□□□□□ -1.09
CLTCL1P53675 AC092106.1-201ENST00000444291 373 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 RN7SL826P-201ENST00000479724 288 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.24□□□□□ -1.09
CLTCL1P53675 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.24□□□□□ -1.09
CLTCL1P53675 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.24□□□□□ -1.09
CLTCL1P53675 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.24□□□□□ -1.09
CLTCL1P53675 AC024940.4-201ENST00000605507 246 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 AC211433.2-201ENST00000608433 387 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 AC021766.1-201ENST00000624404 741 ntBASIC8.24□□□□□ -1.09
CLTCL1P53675 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.24□□□□□ -1.09
CLTCL1P53675 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CLTCL1P53675 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLTCL1P53675 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms