Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.58□□□□□ -1.36
COPAP53621 AC025768.1-201ENST00000510057 267 ntBASIC6.58□□□□□ -1.36
COPAP53621 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 ZNF519P4-201ENST00000514008 125 ntBASIC6.58□□□□□ -1.36
COPAP53621 RN7SKP248-201ENST00000516278 305 ntBASIC6.58□□□□□ -1.36
COPAP53621 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 CYCSP25-201ENST00000525280 316 ntBASIC6.58□□□□□ -1.36
COPAP53621 AP003049.1-201ENST00000529418 457 ntBASIC6.58□□□□□ -1.36
COPAP53621 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.58□□□□□ -1.36
COPAP53621 CR383656.14-201ENST00000551951 406 ntBASIC6.58□□□□□ -1.36
COPAP53621 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.58□□□□□ -1.36
COPAP53621 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 MIR4502-201ENST00000580432 81 ntBASIC6.58□□□□□ -1.36
COPAP53621 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 DYNLL1P1-201ENST00000595442 269 ntBASIC6.58□□□□□ -1.36
COPAP53621 TCL6_3.1-201ENST00000619064 137 ntBASIC6.58□□□□□ -1.36
COPAP53621 AC006249.1-201ENST00000621223 471 ntBASIC6.58□□□□□ -1.36
COPAP53621 AC012254.5-201ENST00000623573 478 ntBASIC6.58□□□□□ -1.36
COPAP53621 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 AL590396.2-201ENST00000636511 1041 ntBASIC6.58□□□□□ -1.36
COPAP53621 LINC02495-203ENST00000636704 242 ntBASIC6.58□□□□□ -1.36
COPAP53621 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.58□□□□□ -1.36
COPAP53621 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.58□□□□□ -1.36
COPAP53621 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 GTF2IP4-201ENST00000453092 2054 ntBASIC6.57□□□□□ -1.36
COPAP53621 AP000547.3-204ENST00000588548 2523 ntBASIC6.57□□□□□ -1.36
COPAP53621 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.57□□□□□ -1.36
COPAP53621 AC020633.1-201ENST00000468439 2247 ntBASIC6.57□□□□□ -1.36
COPAP53621 AC068769.1-201ENST00000474767 2426 ntBASIC6.57□□□□□ -1.36
COPAP53621 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 RN7SKP15-201ENST00000364742 309 ntBASIC6.57□□□□□ -1.36
COPAP53621 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.57□□□□□ -1.36
COPAP53621 RNA5SP251-201ENST00000410614 137 ntBASIC6.57□□□□□ -1.36
COPAP53621 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.57□□□□□ -1.36
COPAP53621 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.57□□□□□ -1.36
COPAP53621 OSTCP4-201ENST00000424397 449 ntBASIC6.57□□□□□ -1.36
COPAP53621 RPSAP65-201ENST00000429660 595 ntBASIC6.57□□□□□ -1.36
COPAP53621 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.57□□□□□ -1.36
COPAP53621 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 RPS10P18-201ENST00000442662 495 ntBASIC6.57□□□□□ -1.36
COPAP53621 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.57□□□□□ -1.36
COPAP53621 VN1R48P-201ENST00000448149 1036 ntBASIC6.57□□□□□ -1.36
COPAP53621 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 Z83838.1-202ENST00000456225 839 ntBASIC6.57□□□□□ -1.36
COPAP53621 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 HMGN1P17-201ENST00000513734 295 ntBASIC6.57□□□□□ -1.36
COPAP53621 SEC11B-201ENST00000518383 499 ntBASIC6.57□□□□□ -1.36
COPAP53621 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 AC009879.1-201ENST00000520029 839 ntBASIC6.57□□□□□ -1.36
COPAP53621 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.57□□□□□ -1.36
COPAP53621 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 AC008055.1-201ENST00000547032 609 ntBASIC6.57□□□□□ -1.36
COPAP53621 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 AC074029.2-201ENST00000551045 634 ntBASIC6.57□□□□□ -1.36
COPAP53621 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.57□□□□□ -1.36
COPAP53621 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.57□□□□□ -1.36
COPAP53621 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 AL078623.1-201ENST00000602702 907 ntBASIC6.57□□□□□ -1.36
COPAP53621 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 AL356986.1-201ENST00000604085 341 ntBASIC6.57□□□□□ -1.36
COPAP53621 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 RN7SL261P-201ENST00000613441 282 ntBASIC6.57□□□□□ -1.36
COPAP53621 AC012653.2-201ENST00000621880 420 ntBASIC6.57□□□□□ -1.36
COPAP53621 AP001052.1-201ENST00000626421 99 ntBASIC6.57□□□□□ -1.36
COPAP53621 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 MSL3P1-202ENST00000440028 1468 ntBASIC6.57□□□□□ -1.36
COPAP53621 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 AC092111.2-201ENST00000611627 1414 ntBASIC6.57□□□□□ -1.36
COPAP53621 CASC19-246ENST00000641625 1606 ntBASIC6.57□□□□□ -1.36
COPAP53621 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.57□□□□□ -1.36
COPAP53621 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
COPAP53621 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
COPAP53621 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPAP53621 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
COPAP53621 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 AP001002.1-201ENST00000625148 1513 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms