Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCFC1P51610 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.27□□□□□ -1.57
HCFC1P51610 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.27□□□□□ -1.57
HCFC1P51610 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCFC1P51610 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCFC1P51610 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.27□□□□□ -1.57
HCFC1P51610 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCFC1P51610 AP001541.1-201ENST00000623322 1904 ntBASIC5.27□□□□□ -1.57
HCFC1P51610 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCFC1P51610 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCFC1P51610 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
HCFC1P51610 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.27□□□□□ -1.57
HCFC1P51610 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCFC1P51610 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
HCFC1P51610 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HCFC1P51610 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 RN7SKP59-201ENST00000410520 314 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AL096829.1-201ENST00000413677 457 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 OR6E1P-201ENST00000414424 923 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.26□□□□□ -1.57
HCFC1P51610 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 SBDSP1-204ENST00000453858 737 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AC011225.1-201ENST00000457751 369 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 SEPT14P1-201ENST00000458703 648 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 COPS8P2-201ENST00000473228 627 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.26□□□□□ -1.57
HCFC1P51610 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.26□□□□□ -1.57
HCFC1P51610 HMGN2P36-201ENST00000529541 409 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AC079600.1-201ENST00000550326 297 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.26□□□□□ -1.57
HCFC1P51610 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 AC091193.1-201ENST00000604640 448 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AC024940.4-201ENST00000605507 246 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AC016769.4-201ENST00000616893 535 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 AC023632.6-201ENST00000624338 2177 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 MAPK10-261ENST00000641050 3109 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 AC078880.4-201ENST00000617627 1749 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 RNA5SP375-201ENST00000362975 119 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HCFC1P51610 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.26□□□□□ -1.57
HCFC1P51610 AK4P4-201ENST00000419465 646 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AL121776.1-201ENST00000429337 372 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.26□□□□□ -1.57
HCFC1P51610 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 AL122020.1-201ENST00000472287 459 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 EIF3LP3-201ENST00000495197 822 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.26□□□□□ -1.57
HCFC1P51610 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 PCNAP4-201ENST00000532690 730 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.26□□□□□ -1.57
HCFC1P51610 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 AC022404.1-201ENST00000555320 273 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 AP000864.1-201ENST00000609424 650 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 uc_338.26-201ENST00000612659 160 ntBASIC5.26□□□□□ -1.57
HCFC1P51610 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.26□□□□□ -1.57
HCFC1P51610 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.26□□□□□ -1.57
HCFC1P51610 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.26□□□□□ -1.57
HCFC1P51610 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HCFC1P51610 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCFC1P51610 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.25□□□□□ -1.57
HCFC1P51610 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.25□□□□□ -1.57
HCFC1P51610 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCFC1P51610 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCFC1P51610 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.25□□□□□ -1.57
HCFC1P51610 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.25□□□□□ -1.57
HCFC1P51610 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.25□□□□□ -1.57
HCFC1P51610 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCFC1P51610 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCFC1P51610 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms