Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 KNOP1P3-201ENST00000446933 426 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.18□□□□□ -1.42
BRCA2P51587 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.18□□□□□ -1.42
BRCA2P51587 AC092490.3-201ENST00000545370 572 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.18□□□□□ -1.42
BRCA2P51587 AC027348.2-201ENST00000624375 642 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
BRCA2P51587 DPCR1-203ENST00000636043 5587 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 RPS3AP38-201ENST00000435889 763 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.18□□□□□ -1.42
BRCA2P51587 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.18□□□□□ -1.42
BRCA2P51587 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.18□□□□□ -1.42
BRCA2P51587 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 GCSHP4-201ENST00000538792 439 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
BRCA2P51587 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.17□□□□□ -1.42
BRCA2P51587 AC022034.3-201ENST00000471393 478 ntBASIC6.17□□□□□ -1.42
BRCA2P51587 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.17□□□□□ -1.42
BRCA2P51587 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.17□□□□□ -1.42
BRCA2P51587 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.17□□□□□ -1.42
BRCA2P51587 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.17□□□□□ -1.42
BRCA2P51587 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.17□□□□□ -1.42
BRCA2P51587 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 USP9YP3-201ENST00000434481 1766 ntBASIC6.17□□□□□ -1.42
BRCA2P51587 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC6.17□□□□□ -1.42
BRCA2P51587 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 RNU1-149P-201ENST00000390870 161 ntBASIC6.17□□□□□ -1.42
BRCA2P51587 RN7SKP100-201ENST00000411258 284 ntBASIC6.17□□□□□ -1.42
BRCA2P51587 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.17□□□□□ -1.42
BRCA2P51587 TVP23CP2-201ENST00000571473 623 ntBASIC6.17□□□□□ -1.42
BRCA2P51587 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.17□□□□□ -1.42
BRCA2P51587 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.17□□□□□ -1.42
BRCA2P51587 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.17□□□□□ -1.42
BRCA2P51587 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCA2P51587 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.16□□□□□ -1.42
BRCA2P51587 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.16□□□□□ -1.42
BRCA2P51587 RPS4XP9-201ENST00000405151 780 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 AC112187.1-201ENST00000455837 479 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 AC004980.4-201ENST00000513375 203 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.16□□□□□ -1.42
BRCA2P51587 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
BRCA2P51587 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
BRCA2P51587 AP002991.2-201ENST00000623807 2801 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 RN7SKP95-201ENST00000362860 303 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 RN7SKP227-201ENST00000364445 330 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 AL591848.1-201ENST00000413092 322 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.16□□□□□ -1.42
BRCA2P51587 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 AC233699.1-201ENST00000569955 1168 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 AC015818.6-201ENST00000584274 634 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.16□□□□□ -1.42
BRCA2P51587 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 ZSCAN29-202ENST00000396976 5595 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.16□□□□□ -1.42
BRCA2P51587 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
BRCA2P51587 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms