Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.46□□□□□ -1.38
CASP4P49662 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.46□□□□□ -1.38
CASP4P49662 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 TXNP4-201ENST00000575018 310 ntBASIC6.46□□□□□ -1.38
CASP4P49662 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.46□□□□□ -1.38
CASP4P49662 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.46□□□□□ -1.38
CASP4P49662 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
CASP4P49662 AL499605.1-201ENST00000604628 403 ntBASIC6.46□□□□□ -1.38
CASP4P49662 CXADRP3-202ENST00000617265 1100 ntBASIC6.46□□□□□ -1.38
CASP4P49662 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.46□□□□□ -1.38
CASP4P49662 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.46□□□□□ -1.38
CASP4P49662 CCAT2-201ENST00000630920 1752 ntBASIC6.46□□□□□ -1.38
CASP4P49662 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CASP4P49662 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.46□□□□□ -1.38
CASP4P49662 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
CASP4P49662 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.45□□□□□ -1.38
CASP4P49662 QRSL1P1-201ENST00000400977 1540 ntBASIC6.45□□□□□ -1.38
CASP4P49662 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CASP4P49662 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CASP4P49662 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CASP4P49662 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CASP4P49662 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CASP4P49662 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
CASP4P49662 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CASP4P49662 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CASP4P49662 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CASP4P49662 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CASP4P49662 RNA5SP273-201ENST00000362484 113 ntBASIC6.45□□□□□ -1.38
CASP4P49662 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.45□□□□□ -1.38
CASP4P49662 AC115283.1-201ENST00000427353 400 ntBASIC6.45□□□□□ -1.38
CASP4P49662 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.45□□□□□ -1.38
CASP4P49662 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.45□□□□□ -1.38
CASP4P49662 GEMIN2P1-201ENST00000454246 752 ntBASIC6.45□□□□□ -1.38
CASP4P49662 AL157777.1-201ENST00000468100 304 ntBASIC6.45□□□□□ -1.38
CASP4P49662 RN7SL193P-201ENST00000491708 276 ntBASIC6.45□□□□□ -1.38
CASP4P49662 PRMT5P1-201ENST00000514351 598 ntBASIC6.45□□□□□ -1.38
CASP4P49662 RN7SKP67-201ENST00000515905 235 ntBASIC6.45□□□□□ -1.38
CASP4P49662 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.45□□□□□ -1.38
CASP4P49662 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.45□□□□□ -1.38
CASP4P49662 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.45□□□□□ -1.38
CASP4P49662 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.45□□□□□ -1.38
CASP4P49662 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.45□□□□□ -1.38
CASP4P49662 LINC00556-201ENST00000569603 412 ntBASIC6.45□□□□□ -1.38
CASP4P49662 GARSP1-201ENST00000570895 719 ntBASIC6.45□□□□□ -1.38
CASP4P49662 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.45□□□□□ -1.38
CASP4P49662 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.45□□□□□ -1.38
CASP4P49662 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CASP4P49662 OR11H2-202ENST00000641517 1085 ntBASIC6.45□□□□□ -1.38
CASP4P49662 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.45□□□□□ -1.38
CASP4P49662 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CASP4P49662 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.45□□□□□ -1.38
CASP4P49662 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.45□□□□□ -1.38
CASP4P49662 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CASP4P49662 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.44□□□□□ -1.38
CASP4P49662 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
CASP4P49662 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CASP4P49662 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CASP4P49662 RNU6-316P-201ENST00000391027 107 ntBASIC6.44□□□□□ -1.38
CASP4P49662 AC004386.1-201ENST00000393214 761 ntBASIC6.44□□□□□ -1.38
CASP4P49662 VN1R12P-201ENST00000403778 876 ntBASIC6.44□□□□□ -1.38
CASP4P49662 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.44□□□□□ -1.38
CASP4P49662 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.44□□□□□ -1.38
CASP4P49662 AC092865.4-201ENST00000477936 615 ntBASIC6.44□□□□□ -1.38
CASP4P49662 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.44□□□□□ -1.38
CASP4P49662 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.44□□□□□ -1.38
CASP4P49662 OR5H7P-201ENST00000514084 930 ntBASIC6.44□□□□□ -1.38
CASP4P49662 AC090424.1-201ENST00000535243 736 ntBASIC6.44□□□□□ -1.38
CASP4P49662 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.44□□□□□ -1.38
CASP4P49662 RPA2P1-201ENST00000556557 721 ntBASIC6.44□□□□□ -1.38
CASP4P49662 AC005244.1-201ENST00000582566 339 ntBASIC6.44□□□□□ -1.38
CASP4P49662 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.44□□□□□ -1.38
CASP4P49662 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.44□□□□□ -1.38
CASP4P49662 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.44□□□□□ -1.38
CASP4P49662 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.44□□□□□ -1.38
CASP4P49662 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.44□□□□□ -1.38
CASP4P49662 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CASP4P49662 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CASP4P49662 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.44□□□□□ -1.38
CASP4P49662 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
CASP4P49662 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CASP4P49662 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms