Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AL121782.1-201ENST00000611242 413 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AL139407.1-201ENST00000613826 1175 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 BNIP3P41-202ENST00000616656 861 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AC005858.3-201ENST00000624756 589 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXA1P49639 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA1P49639 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
HOXA1P49639 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.21□□□□□ -1.57
HOXA1P49639 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.21□□□□□ -1.57
HOXA1P49639 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
HOXA1P49639 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.57
HOXA1P49639 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
HOXA1P49639 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
HOXA1P49639 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXA1P49639 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA1P49639 TRIM53CP-201ENST00000531490 1354 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXA1P49639 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 RNU1-56P-201ENST00000391303 164 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 RNA5SP296-201ENST00000410523 111 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 AC002524.1-201ENST00000411687 547 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 GTF3AP1-201ENST00000416942 1004 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 RPL12P43-201ENST00000420608 499 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXA1P49639 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXA1P49639 UBE2V1P6-201ENST00000430840 422 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 MRPS33P4-201ENST00000434892 317 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA1P49639 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA1P49639 AC092106.1-201ENST00000444291 373 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 GXYLT1P1-201ENST00000446657 490 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 OSTCP1-201ENST00000455507 450 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 RN7SL849P-201ENST00000485236 295 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 OR11I1P-201ENST00000486033 954 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 OR9N1P-201ENST00000491296 333 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 AC105420.1-201ENST00000504389 582 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA1P49639 RNA5SP230-201ENST00000517039 122 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXA1P49639 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA1P49639 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXA1P49639 CR383656.14-201ENST00000551951 406 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXA1P49639 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXA1P49639 WDR45BP1-201ENST00000583470 1029 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 MIR5682-201ENST00000584864 76 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 AC011458.1-201ENST00000604034 617 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 MIR6736-201ENST00000616799 59 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 MIR6829-201ENST00000620375 67 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 LINC00216-201ENST00000623548 1126 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 AL035425.4-201ENST00000624509 1063 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 SHQ1P1-201ENST00000437111 1544 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA1P49639 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXA1P49639 NEK2P2-201ENST00000438441 1338 ntBASIC5.21□□□□□ -1.58
HOXA1P49639 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXA1P49639 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
HOXA1P49639 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA1P49639 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC116158.1-201ENST00000560231 2129 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 AC011815.2-201ENST00000618230 2021 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms