Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 OFD1P17-201ENST00000437639 3018 ntBASIC6.2□□□□□ -1.42
HTTP42858 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.2□□□□□ -1.42
HTTP42858 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HTTP42858 AL049693.1-201ENST00000402760 611 ntBASIC6.2□□□□□ -1.42
HTTP42858 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 AC015977.1-201ENST00000418887 292 ntBASIC6.2□□□□□ -1.42
HTTP42858 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.2□□□□□ -1.42
HTTP42858 AC012512.1-201ENST00000446594 718 ntBASIC6.2□□□□□ -1.42
HTTP42858 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.2□□□□□ -1.42
HTTP42858 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HTTP42858 AL022323.3-201ENST00000623888 5388 ntBASIC6.2□□□□□ -1.42
HTTP42858 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 AL034546.1-201ENST00000623740 3693 ntBASIC6.2□□□□□ -1.42
HTTP42858 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.19□□□□□ -1.42
HTTP42858 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.19□□□□□ -1.42
HTTP42858 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
HTTP42858 FAM3C2-201ENST00000312214 681 ntBASIC6.19□□□□□ -1.42
HTTP42858 BX322650.1-201ENST00000332359 2143 ntBASIC6.19□□□□□ -1.42
HTTP42858 CHIAP3-201ENST00000423668 1133 ntBASIC6.19□□□□□ -1.42
HTTP42858 AC105399.1-202ENST00000447303 205 ntBASIC6.19□□□□□ -1.42
HTTP42858 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.19□□□□□ -1.42
HTTP42858 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 DUTP1-201ENST00000493631 470 ntBASIC6.19□□□□□ -1.42
HTTP42858 IGHV1-14-201ENST00000523391 241 ntBASIC6.19□□□□□ -1.42
HTTP42858 GTF2IP11-201ENST00000526931 420 ntBASIC6.19□□□□□ -1.42
HTTP42858 CYCSP29-201ENST00000533731 318 ntBASIC6.19□□□□□ -1.42
HTTP42858 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.19□□□□□ -1.42
HTTP42858 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.19□□□□□ -1.42
HTTP42858 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.19□□□□□ -1.42
HTTP42858 AL031320.1-201ENST00000604177 357 ntBASIC6.19□□□□□ -1.42
HTTP42858 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.19□□□□□ -1.42
HTTP42858 LRRC37A4P-202ENST00000581296 5372 ntBASIC6.19□□□□□ -1.42
HTTP42858 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 AL078599.1-201ENST00000402075 293 ntBASIC6.19□□□□□ -1.42
HTTP42858 RN7SKP288-201ENST00000516227 268 ntBASIC6.19□□□□□ -1.42
HTTP42858 AL356752.1-201ENST00000615844 593 ntBASIC6.19□□□□□ -1.42
HTTP42858 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 AP002991.2-201ENST00000623807 2801 ntBASIC6.19□□□□□ -1.42
HTTP42858 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HTTP42858 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 RNA5SP515-201ENST00000364570 118 ntBASIC6.19□□□□□ -1.42
HTTP42858 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.19□□□□□ -1.42
HTTP42858 Z92846.1-201ENST00000456203 268 ntBASIC6.19□□□□□ -1.42
HTTP42858 AC021074.2-201ENST00000468434 172 ntBASIC6.19□□□□□ -1.42
HTTP42858 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.19□□□□□ -1.42
HTTP42858 MIR1254-2-201ENST00000579553 63 ntBASIC6.19□□□□□ -1.42
HTTP42858 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.19□□□□□ -1.42
HTTP42858 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HTTP42858 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HTTP42858 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.18□□□□□ -1.42
HTTP42858 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.18□□□□□ -1.42
HTTP42858 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.18□□□□□ -1.42
HTTP42858 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.18□□□□□ -1.42
HTTP42858 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.18□□□□□ -1.42
HTTP42858 CNOT7P1-201ENST00000429006 852 ntBASIC6.18□□□□□ -1.42
HTTP42858 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.18□□□□□ -1.42
HTTP42858 RN7SL481P-201ENST00000477764 299 ntBASIC6.18□□□□□ -1.42
HTTP42858 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
HTTP42858 AC021006.3-201ENST00000530771 192 ntBASIC6.18□□□□□ -1.42
HTTP42858 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.18□□□□□ -1.42
HTTP42858 MIR4691-201ENST00000583764 85 ntBASIC6.18□□□□□ -1.42
HTTP42858 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HTTP42858 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HTTP42858 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HTTP42858 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HTTP42858 AL389915.1-201ENST00000422463 466 ntBASIC6.18□□□□□ -1.42
HTTP42858 DDX39BP1-205ENST00000422507 192 ntBASIC6.18□□□□□ -1.42
HTTP42858 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms