Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.78□□□□□ -1.48
PTPN6P29350 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.78□□□□□ -1.48
PTPN6P29350 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 SMIM12P1-201ENST00000603004 274 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AC008555.7-201ENST00000605008 583 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AC141002.1-201ENST00000607025 279 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 MIR6721-201ENST00000617181 87 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AL683826.1-201ENST00000624104 627 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.48
PTPN6P29350 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
PTPN6P29350 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.77□□□□□ -1.48
PTPN6P29350 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 RNA5SP279-201ENST00000365513 117 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTPN6P29350 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 RBBP4P5-201ENST00000398583 1266 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 VN1R12P-201ENST00000403778 876 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN6P29350 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC094019.1-201ENST00000434678 472 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 RPS3AP38-201ENST00000435889 763 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN6P29350 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC128716.1-201ENST00000475129 166 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN6P29350 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC122718.2-201ENST00000505325 591 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AC091874.2-201ENST00000505889 720 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 RNA5SP434-201ENST00000516647 121 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AC022616.2-201ENST00000523185 300 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN6P29350 MIR4271-201ENST00000582451 67 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTPN6P29350 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 AP001267.4-201ENST00000602598 545 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 RPSAP75-201ENST00000605848 301 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AC093388.1-201ENST00000609166 430 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN6P29350 AC022106.1-201ENST00000612834 766 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AL355974.3-201ENST00000617383 467 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN6P29350 AL109924.4-201ENST00000623089 670 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 CASC19-274ENST00000642018 970 ntBASIC5.77□□□□□ -1.49
PTPN6P29350 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN6P29350 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN6P29350 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN6P29350 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN6P29350 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTPN6P29350 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPN6P29350 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PTPN6P29350 RNU1-65P-201ENST00000363919 148 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 CXADRP1-201ENST00000398098 1095 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC245096.1-201ENST00000413104 546 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AL035422.1-201ENST00000414193 397 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC244033.1-201ENST00000426826 870 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN6P29350 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC002069.1-201ENST00000429649 1159 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms