Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 RNU6-543P-201ENST00000362576 108 ntBASIC6.08□□□□□ -1.44
CD40P25942 RNU6-666P-201ENST00000363499 107 ntBASIC6.08□□□□□ -1.44
CD40P25942 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 RNU4-72P-201ENST00000410754 173 ntBASIC6.08□□□□□ -1.44
CD40P25942 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 AL672212.1-201ENST00000422246 400 ntBASIC6.08□□□□□ -1.44
CD40P25942 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 AC073143.1-201ENST00000436316 395 ntBASIC6.08□□□□□ -1.44
CD40P25942 MYL6P3-201ENST00000436904 432 ntBASIC6.08□□□□□ -1.44
CD40P25942 GSTA7P-201ENST00000438425 448 ntBASIC6.08□□□□□ -1.44
CD40P25942 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 AC005002.1-201ENST00000447458 540 ntBASIC6.08□□□□□ -1.44
CD40P25942 AC007327.1-201ENST00000447461 264 ntBASIC6.08□□□□□ -1.44
CD40P25942 AC234781.3-201ENST00000452540 973 ntBASIC6.08□□□□□ -1.44
CD40P25942 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 AC002075.1-201ENST00000457396 676 ntBASIC6.08□□□□□ -1.44
CD40P25942 VN1R6P-201ENST00000458417 907 ntBASIC6.08□□□□□ -1.44
CD40P25942 RN7SL160P-201ENST00000468558 284 ntBASIC6.08□□□□□ -1.44
CD40P25942 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 RPL23AP37-201ENST00000479658 549 ntBASIC6.08□□□□□ -1.44
CD40P25942 RN7SL569P-201ENST00000494652 288 ntBASIC6.08□□□□□ -1.44
CD40P25942 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.08□□□□□ -1.44
CD40P25942 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 AL132640.1-201ENST00000559594 619 ntBASIC6.08□□□□□ -1.44
CD40P25942 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 AC010287.1-201ENST00000566916 357 ntBASIC6.08□□□□□ -1.44
CD40P25942 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.08□□□□□ -1.44
CD40P25942 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 AP001542.2-201ENST00000593141 364 ntBASIC6.08□□□□□ -1.44
CD40P25942 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 AC011472.4-201ENST00000615848 491 ntBASIC6.08□□□□□ -1.44
CD40P25942 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.08□□□□□ -1.44
CD40P25942 AC103706.2-201ENST00000638080 240 ntBASIC6.08□□□□□ -1.44
CD40P25942 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 AC020978.8-201ENST00000571975 3022 ntBASIC6.08□□□□□ -1.44
CD40P25942 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CD40P25942 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.08□□□□□ -1.44
CD40P25942 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.08□□□□□ -1.44
CD40P25942 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD40P25942 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC6.07□□□□□ -1.44
CD40P25942 CDY19P-201ENST00000411668 1613 ntBASIC6.07□□□□□ -1.44
CD40P25942 CDY18P-201ENST00000438294 1609 ntBASIC6.07□□□□□ -1.44
CD40P25942 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CD40P25942 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 RNU6-185P-201ENST00000384421 107 ntBASIC6.07□□□□□ -1.44
CD40P25942 RNA5SP176-201ENST00000390956 110 ntBASIC6.07□□□□□ -1.44
CD40P25942 AL034374.1-201ENST00000406329 351 ntBASIC6.07□□□□□ -1.44
CD40P25942 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms