Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.06□□□□□ -1.6
COL8A2P25067 SETP20-201ENST00000457046 852 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.06□□□□□ -1.6
COL8A2P25067 UBFD1P1-201ENST00000473259 814 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.06□□□□□ -1.6
COL8A2P25067 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL8A2P25067 SUMO2P19-201ENST00000518920 295 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL8A2P25067 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL8A2P25067 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.06□□□□□ -1.6
COL8A2P25067 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.06□□□□□ -1.6
COL8A2P25067 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.06□□□□□ -1.6
COL8A2P25067 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.06□□□□□ -1.6
COL8A2P25067 PCA3_2.1-201ENST00000612507 409 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 MIR6862-1-201ENST00000613016 70 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 AL021918.2-201ENST00000613415 194 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 MIR6862-2-201ENST00000614755 70 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 AL512356.3-201ENST00000623005 461 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL8A2P25067 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
COL8A2P25067 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.06□□□□□ -1.6
COL8A2P25067 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL8A2P25067 USP9YP3-201ENST00000434481 1766 ntBASIC5.06□□□□□ -1.6
COL8A2P25067 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.06□□□□□ -1.6
COL8A2P25067 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL8A2P25067 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL8A2P25067 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL8A2P25067 AC009831.5-201ENST00000624000 3189 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.05□□□□□ -1.6
COL8A2P25067 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL8A2P25067 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL8A2P25067 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL8A2P25067 AC092642.1-201ENST00000392417 425 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 AC104843.2-201ENST00000427666 297 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.05□□□□□ -1.6
COL8A2P25067 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.05□□□□□ -1.6
COL8A2P25067 RPL23AP19-201ENST00000436229 369 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.05□□□□□ -1.6
COL8A2P25067 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.05□□□□□ -1.6
COL8A2P25067 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.05□□□□□ -1.6
COL8A2P25067 RPL31P15-201ENST00000449770 338 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 SLC25A51P1-201ENST00000468432 871 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 AL122020.1-201ENST00000472287 459 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 AC007998.1-201ENST00000474156 672 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 RN7SL165P-201ENST00000477476 291 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.05□□□□□ -1.6
COL8A2P25067 IGKV3D-34-201ENST00000522638 302 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.05□□□□□ -1.6
COL8A2P25067 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 AC006530.1-201ENST00000555980 571 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.05□□□□□ -1.6
COL8A2P25067 AL136131.3-201ENST00000607600 188 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 AC004836.1-201ENST00000623032 634 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.05□□□□□ -1.6
COL8A2P25067 KARSP1-201ENST00000451871 1752 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 AL359955.1-201ENST00000455242 3275 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
COL8A2P25067 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
COL8A2P25067 AC027088.4-201ENST00000611559 1947 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.05□□□□□ -1.6
COL8A2P25067 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL8A2P25067 AL353763.1-201ENST00000624467 1628 ntBASIC5.05□□□□□ -1.6
COL8A2P25067 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COL8A2P25067 RNF19BPY-201ENST00000458209 1550 ntBASIC5.04□□□□□ -1.6
COL8A2P25067 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL8A2P25067 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL8A2P25067 AC005225.5-201ENST00000623547 2225 ntBASIC5.04□□□□□ -1.6
COL8A2P25067 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL8A2P25067 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.04□□□□□ -1.6
COL8A2P25067 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL8A2P25067 WDR95P-201ENST00000425638 1542 ntBASIC5.04□□□□□ -1.6
COL8A2P25067 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
COL8A2P25067 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COL8A2P25067 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.04□□□□□ -1.6
COL8A2P25067 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COL8A2P25067 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms