Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.06□□□□□ -1.44
PCNAP12004 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 AC124891.1-201ENST00000536322 519 ntBASIC6.06□□□□□ -1.44
PCNAP12004 TDGP1-201ENST00000543961 1229 ntBASIC6.06□□□□□ -1.44
PCNAP12004 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 OR4H6P-201ENST00000563771 921 ntBASIC6.06□□□□□ -1.44
PCNAP12004 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.06□□□□□ -1.44
PCNAP12004 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.06□□□□□ -1.44
PCNAP12004 AL589765.6-201ENST00000601909 549 ntBASIC6.06□□□□□ -1.44
PCNAP12004 AC092574.1-201ENST00000609771 420 ntBASIC6.06□□□□□ -1.44
PCNAP12004 GAPDHP41-201ENST00000613707 975 ntBASIC6.06□□□□□ -1.44
PCNAP12004 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 AC007603.3-201ENST00000636915 979 ntBASIC6.06□□□□□ -1.44
PCNAP12004 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 CDY11P-201ENST00000447168 1651 ntBASIC6.06□□□□□ -1.44
PCNAP12004 AL355834.1-201ENST00000556602 3965 ntBASIC6.06□□□□□ -1.44
PCNAP12004 AL136984.1-201ENST00000607611 1893 ntBASIC6.06□□□□□ -1.44
PCNAP12004 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.06□□□□□ -1.44
PCNAP12004 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.06□□□□□ -1.44
PCNAP12004 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCNAP12004 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCNAP12004 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 SHQ1P1-201ENST00000437111 1544 ntBASIC6.05□□□□□ -1.44
PCNAP12004 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCNAP12004 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCNAP12004 U3.23-201ENST00000391132 200 ntBASIC6.05□□□□□ -1.44
PCNAP12004 AL445238.1-204ENST00000400311 463 ntBASIC6.05□□□□□ -1.44
PCNAP12004 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.05□□□□□ -1.44
PCNAP12004 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 AC002127.1-201ENST00000421305 225 ntBASIC6.05□□□□□ -1.44
PCNAP12004 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.05□□□□□ -1.44
PCNAP12004 GAPDHP19-201ENST00000431768 1005 ntBASIC6.05□□□□□ -1.44
PCNAP12004 AL022237.1-201ENST00000446663 358 ntBASIC6.05□□□□□ -1.44
PCNAP12004 RPS18P1-201ENST00000447840 458 ntBASIC6.05□□□□□ -1.44
PCNAP12004 RANP2-201ENST00000456833 229 ntBASIC6.05□□□□□ -1.44
PCNAP12004 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.05□□□□□ -1.44
PCNAP12004 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.05□□□□□ -1.44
PCNAP12004 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.05□□□□□ -1.44
PCNAP12004 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 SNORA70.17-201ENST00000516449 133 ntBASIC6.05□□□□□ -1.44
PCNAP12004 AC104997.1-201ENST00000519761 717 ntBASIC6.05□□□□□ -1.44
PCNAP12004 KCTD9P6-201ENST00000522306 950 ntBASIC6.05□□□□□ -1.44
PCNAP12004 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 AC008055.1-201ENST00000547032 609 ntBASIC6.05□□□□□ -1.44
PCNAP12004 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.05□□□□□ -1.44
PCNAP12004 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.05□□□□□ -1.44
PCNAP12004 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.05□□□□□ -1.44
PCNAP12004 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.05□□□□□ -1.44
PCNAP12004 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCNAP12004 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCNAP12004 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.04□□□□□ -1.44
PCNAP12004 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCNAP12004 AOX3P-204ENST00000491025 2107 ntBASIC6.04□□□□□ -1.44
PCNAP12004 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCNAP12004 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCNAP12004 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.04□□□□□ -1.44
PCNAP12004 AC020656.2-201ENST00000613291 5309 ntBASIC6.04□□□□□ -1.44
PCNAP12004 AP001541.1-201ENST00000623322 1904 ntBASIC6.04□□□□□ -1.44
PCNAP12004 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 1103.3 ms