Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC10.05□□□□□ -0.8
TOP2AP11388 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
TOP2AP11388 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TOP2AP11388 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TOP2AP11388 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
TOP2AP11388 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOP2AP11388 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOP2AP11388 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOP2AP11388 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC10.04□□□□□ -0.8
TOP2AP11388 AC007568.1-201ENST00000422912 471 ntBASIC10.04□□□□□ -0.8
TOP2AP11388 PSMD10P3-201ENST00000437000 448 ntBASIC10.04□□□□□ -0.8
TOP2AP11388 LDHAP2-201ENST00000437325 985 ntBASIC10.04□□□□□ -0.8
TOP2AP11388 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC10.04□□□□□ -0.8
TOP2AP11388 RPL35AP28-201ENST00000459730 331 ntBASIC10.04□□□□□ -0.8
TOP2AP11388 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC10.04□□□□□ -0.8
TOP2AP11388 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC10.04□□□□□ -0.8
TOP2AP11388 NMNAT1P5-201ENST00000559657 841 ntBASIC10.04□□□□□ -0.8
TOP2AP11388 AC132068.1-201ENST00000623805 459 ntBASIC10.04□□□□□ -0.8
TOP2AP11388 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TOP2AP11388 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TOP2AP11388 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TOP2AP11388 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC10.04□□□□□ -0.8
TOP2AP11388 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOP2AP11388 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TOP2AP11388 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC10.04□□□□□ -0.8
TOP2AP11388 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC10.03□□□□□ -0.8
TOP2AP11388 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 MIR223-201ENST00000385204 110 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 RPSAP50-201ENST00000481955 852 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC10.03□□□□□ -0.8
TOP2AP11388 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TOP2AP11388 AL049779.2-201ENST00000553847 315 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 AC004825.1-201ENST00000555068 586 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 AP002884.5-201ENST00000595053 1132 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 AL121612.2-201ENST00000612261 482 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC10.03□□□□□ -0.8
TOP2AP11388 AC004836.1-201ENST00000623032 634 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC10.03□□□□□ -0.8
TOP2AP11388 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 TEK-202ENST00000406359 3935 ntTSL 2 BASIC10.03□□□□□ -0.8
TOP2AP11388 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC10.03□□□□□ -0.8
TOP2AP11388 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 AL034549.2-201ENST00000618285 3373 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
TOP2AP11388 AC005224.3-201ENST00000584683 2140 ntBASIC10.03□□□□□ -0.8
TOP2AP11388 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC10.03□□□□□ -0.8
TOP2AP11388 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOP2AP11388 RPL7L1P9-201ENST00000431298 745 ntBASIC10.02□□□□□ -0.8
TOP2AP11388 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC10.02□□□□□ -0.8
TOP2AP11388 RBM22P1-201ENST00000578589 1214 ntBASIC10.02□□□□□ -0.8
TOP2AP11388 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.02□□□□□ -0.8
TOP2AP11388 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC10.02□□□□□ -0.8
TOP2AP11388 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.8
TOP2AP11388 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
TOP2AP11388 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
TOP2AP11388 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC10.02□□□□□ -0.8
TOP2AP11388 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
TOP2AP11388 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TOP2AP11388 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TOP2AP11388 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
TOP2AP11388 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC10.02□□□□□ -0.81
TOP2AP11388 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TOP2AP11388 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TOP2AP11388 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
TOP2AP11388 AC005294.1-201ENST00000355509 281 ntBASIC10.02□□□□□ -0.81
TOP2AP11388 AL133270.1-201ENST00000402635 279 ntBASIC10.02□□□□□ -0.81
TOP2AP11388 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC10.02□□□□□ -0.81
TOP2AP11388 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC10.02□□□□□ -0.81
TOP2AP11388 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC10.02□□□□□ -0.81
TOP2AP11388 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC10.02□□□□□ -0.81
TOP2AP11388 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC10.02□□□□□ -0.81
TOP2AP11388 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC10.02□□□□□ -0.81
TOP2AP11388 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TOP2AP11388 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC10.02□□□□□ -0.81
TOP2AP11388 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 MAPK10-304ENST00000641341 3984 ntBASIC10.01□□□□□ -0.81
TOP2AP11388 CPS1-IT1-201ENST00000628368 2306 ntBASIC10.01□□□□□ -0.81
TOP2AP11388 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 MRRFP1-201ENST00000435941 1675 ntBASIC10.01□□□□□ -0.81
TOP2AP11388 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 AC114876.1-201ENST00000490962 1366 ntBASIC10.01□□□□□ -0.81
TOP2AP11388 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
TOP2AP11388 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 RNA5SP443-201ENST00000363083 132 ntBASIC10.01□□□□□ -0.81
TOP2AP11388 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC10.01□□□□□ -0.81
TOP2AP11388 IGLV3-24-201ENST00000517477 197 ntBASIC10.01□□□□□ -0.81
TOP2AP11388 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms