Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SALL4P7-201ENST00000555779 3120 ntBASIC6.67□□□□□ -1.34
MMP3P08254 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
MMP3P08254 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.67□□□□□ -1.34
MMP3P08254 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
MMP3P08254 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.67□□□□□ -1.34
MMP3P08254 RPL36P18-201ENST00000419316 318 ntBASIC6.67□□□□□ -1.34
MMP3P08254 RPL34P3-201ENST00000421454 338 ntBASIC6.67□□□□□ -1.34
MMP3P08254 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.67□□□□□ -1.34
MMP3P08254 RPS7P3-201ENST00000443360 580 ntBASIC6.67□□□□□ -1.34
MMP3P08254 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.67□□□□□ -1.34
MMP3P08254 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.67□□□□□ -1.34
MMP3P08254 AC112187.1-201ENST00000455837 479 ntBASIC6.67□□□□□ -1.34
MMP3P08254 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.67□□□□□ -1.34
MMP3P08254 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.67□□□□□ -1.34
MMP3P08254 NENFP3-201ENST00000503735 313 ntBASIC6.67□□□□□ -1.34
MMP3P08254 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 HMGN2P36-201ENST00000529541 409 ntBASIC6.67□□□□□ -1.34
MMP3P08254 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.67□□□□□ -1.34
MMP3P08254 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 AC051619.2-201ENST00000559063 397 ntBASIC6.67□□□□□ -1.34
MMP3P08254 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.67□□□□□ -1.34
MMP3P08254 MIR3176-201ENST00000582210 90 ntBASIC6.67□□□□□ -1.34
MMP3P08254 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.67□□□□□ -1.34
MMP3P08254 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.67□□□□□ -1.34
MMP3P08254 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.67□□□□□ -1.34
MMP3P08254 AF117829.2-201ENST00000619538 361 ntBASIC6.67□□□□□ -1.34
MMP3P08254 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.67□□□□□ -1.34
MMP3P08254 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 CCNT2P1-201ENST00000423082 1315 ntBASIC6.67□□□□□ -1.34
MMP3P08254 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.67□□□□□ -1.34
MMP3P08254 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.67□□□□□ -1.34
MMP3P08254 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.67□□□□□ -1.34
MMP3P08254 AC092821.2-201ENST00000545710 2042 ntBASIC6.67□□□□□ -1.34
MMP3P08254 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 AOX3P-204ENST00000491025 2107 ntBASIC6.67□□□□□ -1.34
MMP3P08254 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.67□□□□□ -1.34
MMP3P08254 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MMP3P08254 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.67□□□□□ -1.34
MMP3P08254 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 AL391261.1-201ENST00000555712 1479 ntBASIC6.66□□□□□ -1.34
MMP3P08254 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
MMP3P08254 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
MMP3P08254 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.66□□□□□ -1.34
MMP3P08254 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.66□□□□□ -1.34
MMP3P08254 MARK2P12-201ENST00000420129 585 ntBASIC6.66□□□□□ -1.34
MMP3P08254 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.66□□□□□ -1.34
MMP3P08254 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.66□□□□□ -1.34
MMP3P08254 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 RPL5P16-201ENST00000471467 790 ntBASIC6.66□□□□□ -1.34
MMP3P08254 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.66□□□□□ -1.34
MMP3P08254 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.66□□□□□ -1.34
MMP3P08254 ATP5LP3-201ENST00000514223 304 ntBASIC6.66□□□□□ -1.34
MMP3P08254 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.66□□□□□ -1.34
MMP3P08254 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.66□□□□□ -1.34
MMP3P08254 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.66□□□□□ -1.34
MMP3P08254 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.66□□□□□ -1.34
MMP3P08254 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.66□□□□□ -1.34
MMP3P08254 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 AC006213.5-201ENST00000619673 288 ntBASIC6.66□□□□□ -1.34
MMP3P08254 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.66□□□□□ -1.34
MMP3P08254 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.66□□□□□ -1.34
MMP3P08254 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
MMP3P08254 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.66□□□□□ -1.34
MMP3P08254 AC119674.1-213ENST00000641177 1386 ntBASIC6.66□□□□□ -1.34
MMP3P08254 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MMP3P08254 CDY5P-201ENST00000411487 1580 ntBASIC6.65□□□□□ -1.34
MMP3P08254 CDY9P-201ENST00000451397 1580 ntBASIC6.65□□□□□ -1.34
MMP3P08254 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MMP3P08254 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.65□□□□□ -1.34
MMP3P08254 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.65□□□□□ -1.34
MMP3P08254 AC073342.2-201ENST00000595842 1800 ntBASIC6.65□□□□□ -1.34
MMP3P08254 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MMP3P08254 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MMP3P08254 MIR143-201ENST00000385300 106 ntBASIC6.65□□□□□ -1.34
MMP3P08254 PTCD2P2-201ENST00000415579 1095 ntBASIC6.65□□□□□ -1.34
MMP3P08254 GTF3AP1-201ENST00000416942 1004 ntBASIC6.65□□□□□ -1.34
MMP3P08254 AK4P4-201ENST00000419465 646 ntBASIC6.65□□□□□ -1.34
MMP3P08254 BX510359.3-201ENST00000422168 306 ntBASIC6.65□□□□□ -1.34
MMP3P08254 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.65□□□□□ -1.34
MMP3P08254 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.65□□□□□ -1.34
MMP3P08254 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.65□□□□□ -1.34
MMP3P08254 GAPDHP48-201ENST00000436626 961 ntBASIC6.65□□□□□ -1.34
MMP3P08254 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.65□□□□□ -1.34
MMP3P08254 AC093166.4-201ENST00000457867 318 ntBASIC6.65□□□□□ -1.34
MMP3P08254 AC008945.1-201ENST00000505144 499 ntBASIC6.65□□□□□ -1.34
MMP3P08254 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.65□□□□□ -1.34
MMP3P08254 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MMP3P08254 GAPDHP71-201ENST00000511530 1003 ntBASIC6.65□□□□□ -1.34
MMP3P08254 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms