Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL158068.1-201ENST00000506116 616 ntBASIC6.13□□□□□ -1.43
MMP2P08253 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.13□□□□□ -1.43
MMP2P08253 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP2P08253 NPM1P21-201ENST00000513394 762 ntBASIC6.13□□□□□ -1.43
MMP2P08253 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.13□□□□□ -1.43
MMP2P08253 AC084121.1-201ENST00000533882 835 ntBASIC6.13□□□□□ -1.43
MMP2P08253 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.13□□□□□ -1.43
MMP2P08253 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.13□□□□□ -1.43
MMP2P08253 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.13□□□□□ -1.43
MMP2P08253 AC023310.2-201ENST00000553844 547 ntBASIC6.13□□□□□ -1.43
MMP2P08253 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP2P08253 MIR132-201ENST00000591554 101 ntBASIC6.13□□□□□ -1.43
MMP2P08253 AL713998.2-201ENST00000604538 1198 ntBASIC6.13□□□□□ -1.43
MMP2P08253 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP2P08253 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.13□□□□□ -1.43
MMP2P08253 AL139254.3-201ENST00000641097 674 ntBASIC6.13□□□□□ -1.43
MMP2P08253 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP2P08253 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP2P08253 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
MMP2P08253 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP2P08253 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP2P08253 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MMP2P08253 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP2P08253 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.13□□□□□ -1.43
MMP2P08253 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP2P08253 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.13□□□□□ -1.43
MMP2P08253 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MMP2P08253 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
MMP2P08253 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 RNU1-65P-201ENST00000363919 148 ntBASIC6.12□□□□□ -1.43
MMP2P08253 MIR130B-202ENST00000385018 82 ntBASIC6.12□□□□□ -1.43
MMP2P08253 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MMP2P08253 AL121835.1-201ENST00000404250 354 ntBASIC6.12□□□□□ -1.43
MMP2P08253 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP2P08253 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.12□□□□□ -1.43
MMP2P08253 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP2P08253 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 AC093166.3-201ENST00000448785 303 ntBASIC6.12□□□□□ -1.43
MMP2P08253 AC016027.4-201ENST00000450866 277 ntBASIC6.12□□□□□ -1.43
MMP2P08253 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 RN7SL352P-201ENST00000466002 277 ntBASIC6.12□□□□□ -1.43
MMP2P08253 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 PSG10P-201ENST00000501199 1500 ntBASIC6.12□□□□□ -1.43
MMP2P08253 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.12□□□□□ -1.43
MMP2P08253 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.12□□□□□ -1.43
MMP2P08253 SETP21-201ENST00000514799 892 ntBASIC6.12□□□□□ -1.43
MMP2P08253 AC008627.1-201ENST00000517511 1704 ntBASIC6.12□□□□□ -1.43
MMP2P08253 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP2P08253 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP2P08253 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP2P08253 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.12□□□□□ -1.43
MMP2P08253 AC244502.2-201ENST00000543361 851 ntBASIC6.12□□□□□ -1.43
MMP2P08253 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP2P08253 AL845552.1-201ENST00000556820 323 ntBASIC6.12□□□□□ -1.43
MMP2P08253 AC092332.1-201ENST00000563684 829 ntBASIC6.12□□□□□ -1.43
MMP2P08253 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 FAM27E2-201ENST00000619668 403 ntBASIC6.12□□□□□ -1.43
MMP2P08253 AC005225.5-201ENST00000623547 2225 ntBASIC6.12□□□□□ -1.43
MMP2P08253 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP2P08253 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP2P08253 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MMP2P08253 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP2P08253 AL161901.1-201ENST00000624954 3425 ntBASIC6.12□□□□□ -1.43
MMP2P08253 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP2P08253 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP2P08253 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP2P08253 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
MMP2P08253 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
MMP2P08253 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
MMP2P08253 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP2P08253 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP2P08253 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
MMP2P08253 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP2P08253 AC104966.1-201ENST00000467010 1464 ntBASIC6.11□□□□□ -1.43
MMP2P08253 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP2P08253 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms