Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
UBE4BO95155 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.56□□□□□ -1.36
UBE4BO95155 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
UBE4BO95155 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UBE4BO95155 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
UBE4BO95155 AC005522.1-201ENST00000395416 346 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 RNA5SP431-201ENST00000410312 120 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE4BO95155 GAPDHP75-201ENST00000433910 943 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 RPS3AP38-201ENST00000435889 763 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 EIF5AP4-201ENST00000441206 465 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 SERPINA7P1-201ENST00000443077 631 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 BMS1P10-201ENST00000443754 1120 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 PPIAP27-201ENST00000453800 265 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AC114982.2-201ENST00000461396 358 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AC068228.1-201ENST00000461723 211 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
UBE4BO95155 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.55□□□□□ -1.36
UBE4BO95155 KATNBL1P4-201ENST00000503545 918 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AC008629.2-201ENST00000503783 483 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
UBE4BO95155 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 TOMM22P4-201ENST00000511318 336 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE4BO95155 SCARNA18.1-201ENST00000516330 83 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 Vault.2-201ENST00000516519 98 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 RNU6-964P-201ENST00000516524 69 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE4BO95155 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE4BO95155 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE4BO95155 RPA2P1-201ENST00000556557 721 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE4BO95155 AC090236.2-201ENST00000587933 1101 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
UBE4BO95155 AC006115.2-201ENST00000596823 202 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.55□□□□□ -1.36
UBE4BO95155 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.55□□□□□ -1.36
UBE4BO95155 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 MIR6071-201ENST00000616741 78 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AC245014.3-201ENST00000618589 347 ntBASIC6.55□□□□□ -1.36
UBE4BO95155 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.55□□□□□ -1.36
UBE4BO95155 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
UBE4BO95155 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
UBE4BO95155 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UBE4BO95155 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 AL096711.1-201ENST00000404780 554 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 AC016739.1-201ENST00000405359 345 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 AC007679.3-201ENST00000434035 414 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 AL663074.2-201ENST00000440621 479 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 PFN1P6-201ENST00000476786 399 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 RPL38P3-201ENST00000484463 213 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 PFN1P8-201ENST00000497012 543 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 AC011853.1-201ENST00000518911 454 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 AP003396.4-201ENST00000527574 265 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.54□□□□□ -1.36
UBE4BO95155 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE4BO95155 AC008507.3-201ENST00000585753 472 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.54□□□□□ -1.36
UBE4BO95155 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.54□□□□□ -1.36
UBE4BO95155 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 AL731532.1-201ENST00000623972 4236 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.54□□□□□ -1.36
UBE4BO95155 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.54□□□□□ -1.36
UBE4BO95155 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.54□□□□□ -1.36
UBE4BO95155 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 AP000547.3-204ENST00000588548 2523 ntBASIC6.54□□□□□ -1.36
UBE4BO95155 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE4BO95155 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms