Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AP001823.1-201ENST00000604056 1003 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC022106.1-201ENST00000612834 766 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 BIN2P1-201ENST00000504996 1530 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 SNORD8-201ENST00000363915 110 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 MIR130B-202ENST00000385018 82 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 RPL23AP18-201ENST00000416139 468 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 CYP4F30P-202ENST00000420048 405 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AC013268.2-201ENST00000420753 337 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AC023141.3-201ENST00000436698 278 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AC092967.1-201ENST00000449016 481 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 RPL17P2-201ENST00000491913 451 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AL158068.1-201ENST00000506116 616 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 RN7SKP5-201ENST00000517045 272 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AL121579.2-201ENST00000555466 590 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AC024589.2-201ENST00000605642 1294 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AC006924.1-201ENST00000610750 559 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AL352984.2-202ENST00000613699 155 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AC010998.3-201ENST00000613871 631 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 AL512652.1-201ENST00000619006 500 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 MTCO1P28-201ENST00000574177 1528 ntBASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA2E9PIF3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 RNU1-134P-201ENST00000362935 165 ntBASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 AL451142.1-201ENST00000375867 775 ntBASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 MIR433-201ENST00000384837 93 ntBASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 AC092642.1-201ENST00000392417 425 ntBASIC5.62□□□□□ -1.51
NPIPA2E9PIF3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms