Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC009108.3-201ENST00000602739 3515 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 RPL12P13-201ENST00000310055 497 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 RNU6-353P-201ENST00000364266 108 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AL121978.1-201ENST00000402778 359 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 VTA1P1-201ENST00000414044 866 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 PRELID3BP10-201ENST00000431957 584 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 OR13K1P-201ENST00000444577 975 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 RPS27AP8-201ENST00000452665 445 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AL109741.2-201ENST00000455561 343 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 HSPE1P22-201ENST00000456856 327 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 RN7SL160P-201ENST00000468558 284 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AP000805.1-201ENST00000471604 784 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC096708.2-201ENST00000577676 512 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 FAM106CP-201ENST00000582212 507 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC099676.1-201ENST00000608886 657 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AL512624.1-201ENST00000613638 469 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 Z69908.1-201ENST00000622603 247 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC011815.3-201ENST00000624194 473 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC061999.1-201ENST00000624454 177 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 SAMMSON-222ENST00000641901 2727 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC011503.2-201ENST00000594230 1500 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 AC091544.5-201ENST00000620192 3815 ntBASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 RNU6-157P-201ENST00000383957 107 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 UBBP1-201ENST00000392399 473 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AL079342.2-201ENST00000403367 482 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 RN7SKP144-201ENST00000411108 279 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 RPS3P2-201ENST00000421346 701 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 MTCO2P18-201ENST00000457151 658 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 RNU7-140P-201ENST00000459546 60 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC079080.1-201ENST00000479841 822 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC135628.1-201ENST00000568867 534 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 MIR5708-201ENST00000579723 85 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AL031985.2-201ENST00000600955 480 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC064872.1-201ENST00000604823 1072 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC105227.2-201ENST00000615075 605 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AC005277.2-201ENST00000617898 390 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 AL049536.1-201ENST00000625043 744 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 MTND4P26-201ENST00000415971 1359 ntBASIC8.17□□□□□ -1.1
TMEM88BA6NKF7 SGO1P1-201ENST00000603525 1447 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms