Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 HAUS8P1-201ENST00000549005 542 ntBASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 RPSAP73-201ENST00000614820 330 ntBASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AC007683.2-201ENST00000624681 714 ntBASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AC007842.1-201ENST00000597336 2039 ntBASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 RNA5SP507-201ENST00000363603 121 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 RNA5SP131-201ENST00000365452 119 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 RN7SKP151-201ENST00000410230 316 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 NENFP1-201ENST00000419476 466 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 AL731534.1-201ENST00000434711 269 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 RPL32P33-201ENST00000487023 394 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 SNORA43.3-201ENST00000517240 103 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 AP002884.5-201ENST00000595053 1132 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 AC089998.1-201ENST00000548575 3141 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 YES1P1-201ENST00000418510 1628 ntBASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
SHANK2Q9UPX8 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 RN7SKP279-201ENST00000411383 298 ntBASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 VDAC1P6-201ENST00000430062 855 ntBASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 CNOT7P2-201ENST00000441051 832 ntBASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 CYCSP51-201ENST00000443545 318 ntBASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 EEF1B2P5-201ENST00000444820 548 ntBASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 RN7SL352P-201ENST00000466002 277 ntBASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.73□□□□□ -1.01
SHANK2Q9UPX8 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 MIR130A-201ENST00000385274 89 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 MIR550A3-201ENST00000390735 95 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AC007562.1-201ENST00000421819 517 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AC023274.2-201ENST00000445264 521 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AL606490.1-201ENST00000452266 765 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AL672167.3-201ENST00000465951 960 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AC139365.2-201ENST00000517972 253 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AC067852.5-201ENST00000589299 310 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AL049634.1-201ENST00000453770 1720 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AC114876.1-201ENST00000490962 1366 ntBASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHANK2Q9UPX8 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms