Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC9.16□□□□□ -0.94
RIMBP3Q9UFD9 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 RNU11-6P-201ENST00000391127 133 ntBASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 CHMP1B2P-201ENST00000399581 597 ntBASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 AP002981.1-201ENST00000517692 975 ntBASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 MIR4284-201ENST00000578924 81 ntBASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 AP001521.2-201ENST00000608772 546 ntBASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RIMBP3Q9UFD9 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
RIMBP3Q9UFD9 AL662795.2-201ENST00000624252 3706 ntBASIC9.15□□□□□ -0.95
RIMBP3Q9UFD9 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.95
RIMBP3Q9UFD9 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
RIMBP3Q9UFD9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC9.15□□□□□ -0.95
RIMBP3Q9UFD9 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
RIMBP3Q9UFD9 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 SNORA17.1-201ENST00000362945 126 ntBASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 UBE2V1P14-201ENST00000415815 558 ntBASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AC092570.3-201ENST00000420113 693 ntBASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.14□□□□□ -0.95
RIMBP3Q9UFD9 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 GLULP6-201ENST00000399502 913 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 MIR1204-201ENST00000408388 67 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 RNU4ATAC2P-201ENST00000408674 126 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 snoU13.20-201ENST00000459180 104 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 HIRAP1-201ENST00000605318 787 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 WBP1LP8-201ENST00000617401 327 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 AC110373.1-201ENST00000505994 3505 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 AC068287.1-201ENST00000430283 295 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 CDC27P1-201ENST00000445384 715 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 RPL7AP10-201ENST00000481016 791 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 RN7SKP122-201ENST00000515923 296 ntBASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.13□□□□□ -0.95
RIMBP3Q9UFD9 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms