Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNA5SP375-201ENST00000362975 119 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 RNA5SP122-201ENST00000384457 108 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 PPP1R11P1-201ENST00000486095 376 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 RPA2P3-201ENST00000533268 770 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 RPA2P1-201ENST00000556557 721 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 RNU4ATAC-201ENST00000580972 127 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AL645933.2-201ENST00000606743 1207 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AC096708.4-201ENST00000620563 552 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 AC009120.7-201ENST00000623452 780 ntBASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CLIP2Q9UDT6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 RNA5SP477-201ENST00000362639 119 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 SUGT1P2-201ENST00000379452 992 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 RPS7P8-201ENST00000418311 581 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 NME1P1-201ENST00000420914 382 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AL022237.1-201ENST00000446663 358 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 HLA-DPA3-207ENST00000454398 229 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AP003396.4-201ENST00000527574 265 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 SETP3-201ENST00000581726 813 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AC141002.1-201ENST00000607025 279 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AC108673.3-201ENST00000609183 335 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AC129778.1-202ENST00000623812 261 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AL591379.1-207ENST00000635982 261 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 ZNF101P1-201ENST00000435701 1720 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 HDAC1P2-201ENST00000453661 1398 ntBASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.17□□□□□ -1.26
CLIP2Q9UDT6 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 OR7E25P-201ENST00000344844 931 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 HMGN1P20-201ENST00000411849 300 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 CDY8P-201ENST00000428380 1279 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 DNAJC19P5-201ENST00000443295 316 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 CDY20P-201ENST00000447528 1279 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AC005077.1-201ENST00000449226 375 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 CFL1P4-201ENST00000451536 498 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AC016724.1-201ENST00000453215 421 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 RPS27AP3-201ENST00000453803 454 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 283.8 ms