Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 MORF4-201ENST00000447135 971 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 OR7L1P-201ENST00000456181 380 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC010343.2-201ENST00000510162 224 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 SNORD46.2-201ENST00000516021 102 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 Y_RNA.710-201ENST00000516975 110 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AC073488.3-201ENST00000631611 778 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 MIPEPP2-201ENST00000422560 1819 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 AL353763.1-201ENST00000624467 1628 ntBASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HDAC6Q9UBN7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 PSG10P-201ENST00000501199 1500 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 RNFT1P3-201ENST00000340898 1052 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 CDY17P-201ENST00000414121 1282 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 OR3D1P-201ENST00000438288 955 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 PPIAP19-201ENST00000486414 492 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AC090958.1-201ENST00000511122 351 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 Y_RNA.667-201ENST00000516212 107 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 RNA5SP438-201ENST00000516561 112 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 RNU6-551P-201ENST00000516661 103 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AP003396.4-201ENST00000527574 265 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 RPA2P1-201ENST00000556557 721 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AC011445.2-201ENST00000599274 173 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AC245014.3-201ENST00000618589 347 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AC011369.2-201ENST00000624423 1567 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 AP001157.1-201ENST00000550837 2339 ntBASIC6.93□□□□□ -1.3
HDAC6Q9UBN7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 SNORA51.1-201ENST00000363243 140 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 SNORA17A-201ENST00000391185 133 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 CHEK2P5-201ENST00000423877 246 ntBASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC6Q9UBN7 CFL1P4-201ENST00000451536 498 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms