Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 NXF4-202ENST00000416098 1465 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AP005139.1-201ENST00000580702 1647 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 RNA5SP333-201ENST00000363466 118 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 RNA5SP334-201ENST00000364825 118 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 SNORA26.8-201ENST00000391306 124 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 RPL9P21-201ENST00000392269 505 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 DEFB108C-201ENST00000400154 252 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 GSTA12P-201ENST00000402398 508 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AL031577.2-201ENST00000404133 280 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC098592.2-201ENST00000413158 265 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 OR4K6P-201ENST00000416478 897 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 Z75741.2-201ENST00000417272 1167 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC006960.1-201ENST00000419980 153 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 GAPDHP73-201ENST00000423411 1007 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 RPL7P7-201ENST00000428803 703 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC074386.1-206ENST00000487102 761 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 FTH1P8-201ENST00000498161 514 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC023050.1-201ENST00000498198 304 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC005178.1-201ENST00000508392 440 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC079140.3-201ENST00000511111 550 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AP000662.1-201ENST00000530952 487 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC011260.1-201ENST00000578420 472 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 MIR4999-201ENST00000585029 91 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC079089.3-201ENST00000603094 673 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AL445647.2-201ENST00000615170 130 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 OR1N1-202ENST00000619659 939 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 AL356121.2-201ENST00000624715 780 ntBASIC7.06□□□□□ -1.28
SSU72Q9NP77 FLII-230ENST00000628188 156 ntTSL 5 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.06□□□□□ -1.28
SSU72Q9NP77 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL078595.2-201ENST00000605309 1780 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 RNU6-1251P-201ENST00000364502 107 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC068138.1-201ENST00000412635 217 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 MTND1P21-201ENST00000412991 285 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 RPSAP60-201ENST00000415403 880 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL513325.1-201ENST00000417716 1034 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC231533.2-201ENST00000419045 978 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL390840.1-201ENST00000420303 988 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms