Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 USP9YP19-201ENST00000412165 485 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 SETP10-201ENST00000424368 814 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC016027.5-201ENST00000427227 210 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 PPIAP32-201ENST00000449940 472 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AL355032.1-201ENST00000472981 438 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC008429.4-201ENST00000521201 182 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 MIR4433B-201ENST00000581329 102 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 NDUFB9P1-201ENST00000604683 510 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AC074276.2-201ENST00000619891 348 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 LINC00216-201ENST00000623548 1126 ntBASIC5.98□□□□□ -1.45
BRF2Q9HAW0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
BRF2Q9HAW0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 RNU4-39P-201ENST00000362455 127 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 RNU4-64P-201ENST00000410795 131 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 RPS7P14-201ENST00000426405 583 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC112492.2-201ENST00000432774 1030 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 ZFAND6P1-201ENST00000434138 605 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AL590399.4-201ENST00000436561 601 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 MTCO3P43-201ENST00000440974 771 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 COX4I1P2-201ENST00000447446 547 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 RN7SL39P-201ENST00000462264 297 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC098583.1-201ENST00000480875 255 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 HMGB1P47-201ENST00000511281 589 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 OR10D4P-201ENST00000525892 951 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AP001858.2-201ENST00000536213 601 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 DUX4L52-201ENST00000549363 777 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 MIR3157-201ENST00000578688 85 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 MIR212-201ENST00000586026 110 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC027334.1-201ENST00000603257 310 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 GAPDHP41-201ENST00000613707 975 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 RMST_5.1-201ENST00000618704 126 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 AL355377.1-201ENST00000621125 1653 ntBASIC5.97□□□□□ -1.45
BRF2Q9HAW0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BRF2Q9HAW0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms